KEGG   Poecilia reticulata (guppy): 103467774
Entry
103467774         CDS       T05149                                 
Symbol
pan2
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103467774 (pan2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pret03019]
    103467774 (pan2)
Enzymes [BR:pret01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     103467774 (pan2)
Messenger RNA biogenesis [BR:pret03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103467774 (pan2)
  mRNA degradation factors
   3'-5' decay
    Pan complex
     103467774 (pan2)
SSDB
Motif
Pfam: PAN2_N UCH_1 RNase_T UCH WD40_like
Other DBs
NCBI-GeneID: 103467774
NCBI-ProteinID: XP_008412664
UniProt: A0A3P9MVB9
Position
LG7:16673162..16691778
AA seq 1211 aa
MMNFEGLDPGMGEYPAGLHGTLEAGLEPALDPHLNPSLLQGVELDPEGLAVTVPEPVHLM
EGVFSELHSVVSEVGIPVTATHFDLQEEMLWMGNHRGHVTSYFGPTMGRHSSFQVHATDD
IRHIQSLETGVLFLSKNNLKCYTRGGLVMFDYPMEEGADMHSLLMTDNNTLLMGGLQNYV
VEVDLNTVQETQKFTVEIPGVAIMRQTSRFFFCGHTSGKVTLRDLRTFKTENEFDAFSGS
LSDFDVHGNLLAACGFSSRGLNGLACDRFLMVFDLRMMRAVTPLQVHVDPLFLRFIPTYT
SRLVIISQTGQCQFCEPTGLANVADIFHVNTVGQLLMSFDVSSSKQALAFGDSGGCVHLW
SDVPEVSFNDYSRETDFPLPCLVDTLPQLDWNHDLLPLSLIPMPLTSTEPLLSDWSTPLS
TPSPRRAPPVDPEILRTMKTVGFIGYAPNPRTRPRNQVPYKIKDVELDYDNYNQVPESPI
GRDEEPHLCMVPKKYRKVTIKYSKLGLEDFDFKHYNRTLFAGLEPHIPNAYCNCMIQVLY
FLEPIRCLVQNHLCQKEFCLACELGFLFHMLDLSRGDPCQASNFLRAFRTIPEASALGLI
LADSDEQTGKAKLGRLIQSWNRFILTQLHQETQEQEGPQAYRGASSSSLGSSAESAIGKL
FGCEVENSSLCRCGKETVRSSLTLLFTMHYPEQNSQDKTVKEYDFAEILKRSICLEQNTQ
AWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSAKEAEFWKVQAECAYNKAMQKEAMKPA
KRTEPPPMPTEWCLDGEESCSTEGFTFDTRAEDLRHVWIPATLKMSISKSQGLEIVSWSE
GDEISAAEEADGVSLYDLVVTVPHIQDARTGGNLVAHIKVGETYHQRKEGVTHQQWYLFN
DFLIEPIDKTEAAQFDVSWKVPAILYYAKRNYHSRYDLRIKNPIDASVLLTEASLARKQR
KSHATFIPLMVSEMPQAGDLVGLDAEFVTLNQEEAELRSDGTKSTIKPSQMSVARITCVR
GQGPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLID
TGVRFVGHGLQKDFRVINLLVPKDQVIDTVYLFHLPRKRMISLRFLAWYYLDLNIQGETH
DSIEDARTALQLYRKYLELSRGGGSDEVRKVLKGLYEKGRQLDWKVPDSDTGDGQGRTKR
HQREEQFEKIL
NT seq 3636 nt   +upstreamnt  +downstreamnt
atgatgaactttgagggtctggaccctgggatgggtgagtacccagctggcctccatggg
actctggaggcagggctggagcccgccctggacccgcacctcaacccgagcttgctgcag
ggcgtggagctggacccggaggggctggctgtgacggtccccgagccggtgcacctgatg
gagggcgtgttctctgagctccacagcgtggtctcagaagttggcatcccagtcaccgca
acccattttgatctccaagaggagatgctctggatgggaaaccacagaggccatgttacg
tcgtactttgggccgacaatgggccgccattcttctttccaagtccacgccacagatgac
atccgacacattcagagcttggagacgggggtgttgttcctctctaagaacaacctcaaa
tgctacactagaggaggccttgttatgttcgattacccgatggaggaaggagctgatatg
cacagtctcctgatgacggataacaacacgctgctcatggggggattacagaactacgtt
gtggaagttgatctgaacacagttcaagaaactcaaaagtttacagttgagatacctgga
gtcgcaataatgcgtcaaacgagtcgtttcttcttctgtggccacacatctggcaaggtc
accctacgcgaccttcgcacctttaagacggagaatgagtttgacgcgttttccggcagc
ctgtcggacttcgacgttcacgggaacctcctggctgcgtgcggtttctccagccgaggc
ctgaacgggttggcgtgcgaccgtttcttgatggtcttcgacctccgcatgatgcgagcc
gttactccgctgcaggtccacgtggatcccctcttcctgcgcttcatccccacctacacg
tcccgcctggtcatcatctcacagacaggtcagtgccagttctgtgagcccactggtctt
gccaatgtggcggacattttccacgtcaacactgtcggtcagctgctcatgagctttgac
gtttcatcgagcaaacaagccttggcctttggggactcgggtgggtgtgtgcacctgtgg
tctgacgtcccggaggtctccttcaatgactactcccgggaaacagactttcctctgccc
tgtctggtggacacgttgcctcagctggactggaatcacgacctgctgcccctttctctc
atccctatgccgctaaccagcaccgaaccgctgctgtcagactggtccactcctctgtct
acaccaagtcccagacgagctcctccggtcgacccggaaatcctgcgcaccatgaaaacc
gtcggtttcatcggttatgcaccaaatcctcgtacacgccctcgaaaccaggtcccttat
aagataaaagacgtggagctcgattacgacaactacaaccaggttccagagtcgcccatc
ggacgtgacgaagagccgcacctctgcatggtgcccaagaagtacaggaaggtcaccatt
aaatactccaaactcggactggaggactttgacttcaaacattacaacagaactttgttt
gcgggtctcgagcctcacatccccaacgcctactgtaactgtatgatccaggtgttgtac
ttcctggagccgatcaggtgtctggtgcagaaccatttgtgtcagaaggagttctgtttg
gcttgtgagctgggtttcctcttccacatgctggatttgtcccgaggagatccgtgccag
gccagtaacttcctccgagcgtttcgtaccatccccgaagcctcggctctcggtctcatc
ctcgccgactccgatgagcaaactgggaaagccaaactgggacgcctgatccagagctgg
aatcgcttcatcctcacccagcttcaccaggagactcaggagcaggaaggcccgcaggcc
tacaggggcgccagcagcagctctctgggctcctctgctgagtcggccatcgggaagctg
tttggctgtgaggtggagaacagcagcctgtgccgctgtgggaaggagacggtgcgatcc
tcgctcaccttgctcttcaccatgcattacccagagcagaactcccaggataaaacagta
aaggagtatgactttgctgagattctgaaaagaagcatctgtttggagcaaaacactcaa
gcatggtgtgaaaactgtgagaagtaccagcctacagttcaaacacgcaacataaggtgt
ctgccggatgtcctggtcataaactgtgaagtaaacagcgctaaagaggccgagttctgg
aaagttcaggcagagtgtgcttacaataaggccatgcagaaagaggccatgaagcctgca
aagcgtactgagccgccacccatgcctacagagtggtgcttagacggggaggagagctgc
agcacggagggtttcacctttgacacccgggccgaggatctgcggcacgtctggatcccc
gccacgctcaagatgtccatcagcaaaagccaagggctggagatcgtcagctggtccgaa
ggagacgaaatcagcgccgctgaggaggcggacggggtttccctgtacgacctcgtggtc
accgtgccgcacatccaggacgctcgcaccggcggaaacctggtcgcacacatcaaagtg
ggagagacgtaccatcaaaggaaagagggagtcacacaccagcagtggtacctcttcaat
gattttctaatcgaacccattgataagactgaagctgctcagtttgacgtcagctggaaa
gttccagccatcctgtactacgccaagaggaactaccactccagatacgacctccgcatc
aaaaacccaatcgacgccagcgttctgctgacggaggcgtcgctggcccggaaacagagg
aagagtcacgccaccttcatccccctcatggtcagcgagatgccgcaggcgggcgacctg
gtggggctggacgccgagttcgttacgctgaaccaggaagaggcggagctgcggagtgac
ggcaccaagtccaccatcaaacccagtcagatgtccgtagccaggatcacctgtgtgagg
ggccaggggcccaacgagggggtccccttcatcgacgactacatctcaactcaggagcag
gtggtcgactatttgacgcagtactccggcatcaaaccaggagatctggatgctaaaatt
tcctccaaacatttgaccacactgaagtccacatacctaaagcttcgcttcctcatcgac
accggcgttcgcttcgtcggccacggtttgcagaaagacttccgggtcattaatctcctg
gtccccaaggatcaagtcattgacacggtctaccttttccatttgccccggaagagaatg
atttctttacgattcctcgcttggtattatttagatctcaacatccagggggaaacccac
gacagcatagaggacgcacgcaccgctctgcagctctacaggaagtacctggagctcagc
cgcggaggagggagcgacgaagtaaggaaggtcctgaagggactctacgaaaaaggccgc
cagctggactggaaagtcccagattcagatactggagacggtcaaggtaggacaaaacgg
caccagagagaggagcagtttgagaaaattctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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