KEGG   Poecilia reticulata (guppy): 103471896
Entry
103471896         CDS       T05149                                 
Symbol
ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03013  Nucleocytoplasmic transport
pret03015  mRNA surveillance pathway
pret03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103471896 (ncbp1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103471896 (ncbp1)
   03015 mRNA surveillance pathway
    103471896 (ncbp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pret03019]
    103471896 (ncbp1)
   03041 Spliceosome [BR:pret03041]
    103471896 (ncbp1)
Messenger RNA biogenesis [BR:pret03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     103471896 (ncbp1)
Spliceosome [BR:pret03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    103471896 (ncbp1)
SSDB
Motif
Pfam: MIF4G_like_2 MIF4G_like MIF4G AAA_13 RRF Vfa1 AAA_11 Jnk-SapK_ap_N DUF1690 DUF1664 PHM7_cyt Importin_rep_6
Other DBs
NCBI-GeneID: 103471896
NCBI-ProteinID: XP_008419387
Position
LG10:complement(27626809..27636717)
AA seq 796 aa
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCSVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YIEAVYLVRFLSDLVNCHVIAAPSMVVMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQIEGYLKRRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPIPRVIFRMFDYTDAPEG
PVMPGSHSAERFVIEENLHCIIKTHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPLPPHLDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFINWFSHH
LSNFQFRWSWDDWADCLTLDLEKPKPKFVKEVLEKSMRLSYHQRIVDIVPPTFSALIPAE
PIFSYKYGDESGTSLPGYPVSITVSNAIKNRATNEEILAILKEVPNPNQEDDDDEGETFN
PLKIDVFLQTLLHLAAKSFSHSFSALGKFHEILKNLTESDDGKLHILKVVYEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLFIWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQHKRRDSGDDEDMEKNSEEDEEGQLEEQIERLQEKVESAQSEQKNLFLVIF
QRFIMLLTEHLVRCETGSVDISTPWYKNCIERLQQVFLMHHGTIQQYMGTLENLLFTAEL
DHHILAVYQQFCALQL
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgtccaggaggcgacatagcgatgagaacgacggaggtcaagctcataagaggaggaga
acatctgagcccattgaaattgaagatcgcctggagtcgttgatatgtcgcgtaggagaa
aaaagcacttcatccctcgagagcaacctcgagggcctcgcaggcgtcctggaggccgac
cttcccaactacaaaaacaaaatcctgcgtattttatgttctgtcgctcgcctgctgcca
gagaagctcaccgtctacacaacgttagttggtctcctcaatgccagaaactacaacttt
ggtggcgagtttgtggaggcgatgatcaggcagctgaaggaaaccttaaaaaacaacctg
tatattgaagcagtttacctggtgcgctttctgtctgatttggttaactgccatgtcatc
gccgctccatctatggtggtaatgtttgaaaattttgtcagtgttactcaagaggaagac
gtgccacaggttcgatcggattggtttgtgtatgtcgttctgtcctgccttccctgggtc
ggaaaggaactttatgagaagaaggatgttgaaatggatcgactcctcagtcagattgaa
ggctacctgaagaggagagtgaagactcatgttcccatgctgcaggtgtggacagcagag
aaaccccatccacaggaagagtacctggactgtctgtgggcccagatccagaagctgaag
aaagaccgctggcaggagcgccacatccttcgtccgtacatcgctttcgatagcgttctc
tgtgaggcgctgcagcacaacctgcccccgttcaccccgccgggacacatgcctgatgcc
cagtaccccatcccccgggtcatcttccgcatgttcgactacaccgatgccccagagggt
cccgttatgccgggcagccattctgcggagcgatttgtgattgaagaaaacctgcactgt
atcatcaaaacccactggaaagagaggaaaacatgtgctgcccagctgctcagttaccct
ggaaaaaacaagatcccactcaactaccacatcgtggaggtgatctttggagaacttttc
cagctgccgttaccgccccacctcgacgtcatgtacactacgctcctcatcgagctctgc
aagctgcagccagggtcactccctcaagttctggcccaggccacagagatgctttacatg
aggctggacacaatgaacaccacctgcatagacagattcatcaactggttttcccatcat
ttgagcaacttccagtttcgatggagctgggatgactgggcggactgtttgacattggat
ttagagaaaccaaaacccaagtttgtcaaagaggttctggagaaatcaatgagactttca
taccatcagaggatcgtggacatcgtccctccaactttctccgccctcatccctgctgag
cccatcttttcttacaaatacggagacgagagtggcacctcgttgccaggttacccagtt
tccattacagtttccaacgccataaagaaccgagcgaccaacgaggaaatcctcgccatc
ctcaaagaagtccccaacccgaaccaggaggatgatgatgatgagggtgaaaccttcaac
ccactgaagatcgatgtgtttcttcagactcttctccatctggcagcaaagtccttcagc
cattccttcagcgcgctcggcaaattccacgagatccttaaaaacctgacggaaagcgac
gacgggaagctgcacatcctgaaagtggtttatgaggtgtggaggaaccaccctcagatg
atcgccgtgttggtggataaaatgattcggacgcagatcgtggattgtgccgctgtcgct
aactggctcttctctcaggacatggctcacgagttcaccagacttttcatctgggagatt
ctgcactcaaccatccgaaagatgaataaacacgtgcagaagatccagaaggagctggag
gaagctaaagataagctggagaaacagcagcacaagaggagggacagtggggacgacgag
gacatggagaagaacagcgaggaggacgaggagggtcagctggaggagcagatcgagagg
ctgcaggagaaggtggagtctgctcagagcgagcagaaaaacctcttcctcgtcatcttc
cagcgcttcatcatgctgctgacggagcatctggttcgctgcgagacgggcagcgtcgac
atcagcacaccctggtataaaaactgcatcgagcggctgcagcaggtcttcctcatgcac
catggaaccatccagcagtatatgggaactctggagaacctgctgttcaccgctgagctc
gaccatcacatcctggccgtctaccagcagttctgcgcgttgcagctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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