KEGG   Poecilia reticulata (guppy): 103475593
Entry
103475593         CDS       T05149                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
  KO
K07466  replication factor A1
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03030  DNA replication
pret03420  Nucleotide excision repair
pret03430  Mismatch repair
pret03440  Homologous recombination
pret03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103475593
   03420 Nucleotide excision repair
    103475593
   03430 Mismatch repair
    103475593
   03440 Homologous recombination
    103475593
   03460 Fanconi anemia pathway
    103475593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pret03000]
    103475593
   03032 DNA replication proteins [BR:pret03032]
    103475593
   03400 DNA repair and recombination proteins [BR:pret03400]
    103475593
Transcription factors [BR:pret03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    103475593
DNA replication proteins [BR:pret03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    103475593
DNA repair and recombination proteins [BR:pret03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     103475593
   MMR (mismatch excision repair)
     103475593
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     103475593
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon
Other DBs
NCBI-GeneID: 103475593
NCBI-ProteinID: XP_008425591
UniProt: A0A3P9NZV9
Position
LG14:complement(4680550..4717366)
AA seq 674 aa
MTAKLTQGAVEALVNGSHVEKLVLQLLNIRQINTTGVPRYRLMMSDGQHYLSSFLMATQL
NHLAEEKLLVPHCVCLLKRMTNNTLSDGRHVVVVVDMDVLKSAEDAGGKIGNPTSYSTDD
KLSSPNKVSSTTSEPSSTSDAEVPGPSNSKGWGKGSTGKAPVKTSPMKTSPMKGAPLKTS
PMKASPMMTSPMKGSPMKASPMMTSPMKGSPMKGSPMKGSPMMTSPMKGSPMKASTSSPG
SVPKVMPIATLNPYNSKWTIRARVTNKSNIRNWSNSRGEGKLFSFEVVDESGEIRITAFN
NEVDKFFALLEQGKVYYISKATLKVANKQYTTLKNDYEMTLHAHSSIVPCTDSQDVPVMQ
CDFVPIGELENRDKDSIIDIIGVCNSAEDVSRITTKTSREVSKRAINLIDTTGKMVTVTL
WGEEAEKFDDSGQPVVAIKGARLSDFRGISLSALFSSTIMVNPDLPEAFRLRAWYDREGH
AVDSQSLTETVSVAVGSKMNWKTLSDVKNENMGHREKADYFSCVATIVYMRKENCLYQAC
PSSDCNKKVIDQQNGFYRCEKCNREFPNFKYRLLLSANLADFGDNQWVTCFQETAEVLLG
RKAEELGQLRETDEAEFDEVFQKANFSTHIFKNRVKLETYNDESRVKVTVMEVLPVDHRV
YSRRLLSNIRKLAH
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgactgcgaaactaacacagggggcagttgaagccctggtcaatggatcccatgtagag
aaactggtgctgcaattactgaacattcgtcagattaacaccacaggtgtgcccaggtac
cgcctcatgatgagtgatggtcagcactacttgtcttccttcctgatggccacccagttg
aaccatctggcagaagagaagctccttgtaccacattgtgtgtgtttgttaaaaaggatg
accaataacactttgtcagatggccggcacgtggtcgtcgttgtggacatggacgtcttg
aagtcagcagaagatgctggaggaaagattggaaatcccacctcatattcaacagatgac
aagttgtcatctccaaataaggtgtcatcaaccacctctgaaccatcgtccacttcagac
gctgaggtacctggaccatccaacagcaaaggatggggaaaaggttccactggaaaagct
cctgtgaagacttcaccaatgaagacctctcctatgaaaggggcgcccttaaagacgtca
cccatgaaagcctcaccaatgatgacctctcctatgaaagggtcacccatgaaggcttca
ccaatgatgacctctcccatgaagggttcgcccatgaaagggtcacccatgaagggttca
ccaatgatgacctctcccatgaagggttcacccatgaaggcgtccaccagttcaccaggt
tctgtcccaaaagtgatgcctatcgctaccctcaacccgtacaacagcaagtggactatc
agagccagagtcacaaacaaatccaatatccgtaactggagtaactccagaggggagggc
aagctcttctcctttgaggtcgtggatgagagtggtgaaatcaggatcacagccttcaac
aatgaagtggacaagtttttcgctctgttggagcaaggcaaggtgtactacatctcgaag
gcgactctgaaggtagccaacaaacagtatacgacactgaagaacgactacgagatgacc
ctccacgctcattcatctatcgtaccgtgtacggacagtcaggatgtcccagtcatgcag
tgtgactttgtgcccatcggagagctggaaaaccgagacaaagactccatcattgatata
attggagtgtgcaacagtgcagaggatgtatcccgtatcaccactaagaccagccgggaa
gtctccaagagggccatcaacctaatagacaccactggcaaaatggtgacagtcacactg
tggggagaagaggcggagaagtttgacgactccggacagcctgttgttgccatcaaagga
gctcgcttgtctgattttcggggcatatctctctcagctttgttcagttctacaatcatg
gtcaacccagatttacccgaagccttcagactcagggcctggtatgaccgggaaggtcat
gcagttgacagccagtcgctaacagaaaccgtgtcagtcgctgttggatcgaagatgaac
tggaaaacgctgagcgatgttaagaatgaaaacatgggacacagagaaaaggcagactat
tttagctgcgtggcaactatagtttacatgcgtaaagaaaattgtttgtatcaagcctgt
ccgtcttcagactgcaacaagaaggtcatagaccaacagaatggtttttaccgctgcgag
aagtgtaacagagagttccccaacttcaaatatagactcctactttcagctaacttggca
gacttcggggataaccagtgggtgacatgcttccaggagacagctgaggtcctgctgggt
cgcaaggcagaagagctgggacagctcagagaaacagacgaggcagagtttgatgaagtc
ttccagaaagccaacttctctacccacatctttaagaaccgagtcaagctggagacatat
aatgacgagagtcgggtgaaagtgaccgtaatggaagtacttcctgtcgaccacagagtg
tacagcagacgactcctcagtaacattcggaaactggctcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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