KEGG   Poecilia reticulata (guppy): 103478855
Entry
103478855         CDS       T05149                                 
Symbol
col6a2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
  KO
K06238  collagen type VI alpha
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04510  Focal adhesion
pret04512  ECM-receptor interaction
pret04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pret00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103478855 (col6a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103478855 (col6a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103478855 (col6a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pret04147]
    103478855 (col6a2)
   00536 Glycosaminoglycan binding proteins [BR:pret00536]
    103478855 (col6a2)
Exosome [BR:pret04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103478855 (col6a2)
Glycosaminoglycan binding proteins [BR:pret00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103478855 (col6a2)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   103478855 (col6a2)
SSDB
Motif
Pfam: VWA Collagen VWA_2 VWA_3 TssR_VWA
Other DBs
NCBI-GeneID: 103478855
NCBI-ProteinID: XP_008431156
UniProt: A0A3P9QCA6
Position
LG17:complement(582861..600831)
AA seq 1013 aa
MLALETVVLCLLLGALTHAEKADCNQRRECPIHLYFTIDTSETIALQESPPGALVKSIRE
FTDQFVRRLKDEEIRNTVPITWAIGGLHFSQTQQVFSPIQGKDAFLSSLVRIENYLGKGT
YIDCALRRMSEEMLLGPASSVTPLRFAVVITDGHVTGNPCGGIKVSAEDARDKGIRVFAV
AASTNIEETGLKEIANSPASVFRDDFMAVDLSKGRPIIQTSTMDRIIKTMKHMAFVDCYN
VSCLETPGQPGPKGHRGQKGAKGDNGEAGLKGERGRPGDPGIEGPIGQPGIKGELGPIGD
KGEIGTQGKKGVAGIPGRNGTDGQKGKLGRIGAPGCKGDPGDRGPDGHPGDVGERGPSGT
DGEKGDPGRPGRAGPPGPPGEGGPQGERGSNGSPGVPGTKGTPGLPGSPGKRGEEGRRGD
YGPKGEPGPDGTKGEKGEMGPEGLRGVPGESGSKGAKGDTGLPGPRGPPGASGEPGRNGT
RGDPGDMGPRGEPGQPGPKGDAGRPGFSYPGPRGDPGERGDPGKRGPPGSRGDCGQKGDP
GNKGTPGESGEPGPTGEPGLRGPRGGPGRDGDPGPEGDPGLTECDVMNYIRETCGCCDCE
KRCGALDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSFAKDPQSETGTRVGVVQYSHN
GTFQAINLNDSNINSLTAFKEAVKRLEWIAGGTWTPSALKFAYDHLIRDSRRAKANVTVV
VITDGRFDPRDDDRLLPYLCNHPGVDVSAIGIGDMFEQVEENESLQSIACQKEGRVMGMR
RFADLVAEEFIDKIETVLCPDPAIICPDLPCKSEPAVASCVQRPVDVIFMLDGSERMGLE
NHLRAKEFIENVARRLTLADGPTDDTKARLALLQFGSTGDHKEEFPLTHNLTVIVDSLAA
VNYLDSSSALGNAIIYAVNNLVVRQSQRLSRRNAEVAFIFITDGITSTDQLEEGVEAMKR
VEGVPTVIALGGDTDEEVLRKVSLGDSSAIFRGDNFFVLGKSAFFERFIRWIC
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgcttgcgttggagactgtcgtgctctgtcttctcctcggagccctgactcacgccgag
aaagcagactgcaaccagaggagagaatgtcccatacacctgtacttcaccatagacaca
tctgagaccatcgcgctgcaggagtcgccccctggagcgttggtgaaaagcatccgggaa
ttcacggatcagtttgtgcggcgattgaaagatgaagaaatccggaacactgttccaatc
acctgggctatcggtggactgcacttctcccagactcagcaggttttcagccccatccaa
ggaaaggacgcgttcctctcctctctcgtgagaattgagaattaccttggaaaaggcacc
tacatcgactgcgctctccgaagaatgtccgaggagatgctgcttggacccgcttcaagc
gtcacacccctgcggttcgccgtggtcatcactgacggccacgtgaccggaaacccgtgt
gggggcatcaaggtgtcagcggaagacgcgcgtgataagggcatcagggtgtttgccgta
gcggcatcgacgaacatcgaggagacgggactgaaagagattgccaactccccggcgtcg
gtcttcagggacgacttcatggctgtggaccttagcaagggcagaccaattatacaaacc
tcaacaatggaccgcattatcaagacaatgaaacatatggcgttcgtagactgttataac
gtgtcctgcctggagacaccagggcaacctggtccaaaaggccacagaggacagaaagga
gctaaaggagacaayggtgaagcaggactaaaaggtgaaagaggtcgcccaggagacccc
ggcattgaaggtcccatcggtcagcctggtatcaagggtgaacttggtccaataggcgac
aagggggagattggaactcagggcaaaaagggtgtggctggtattccaggacgtaacgga
actgatggacaaaagggcaaacttggacggattggtgccccaggttgcaaaggagaccca
ggcgacagaggtcccgatggtcatccaggagatgtcggcgaacgtggtccttcaggaact
gatggggagaagggtgaccctgggcgcccaggaagagccggtccccctggcccgcctgga
gaaggtggaccacagggagaaagaggaagtaatgggtcrcctggcgttcctggaactaaa
ggaacccctggactccctggaagtccgggaaaacgaggcgaggaaggaagaagaggagac
tacgggcccaaaggtgaacctggaccagatggtaccaagggagagaagggcgaaatggga
ccagagggcttgagaggagtccccggagaatcgggaagcaaaggtgcaaagggagacact
ggcttgccaggacctagaggaccaccaggagcttcaggggagcctggaagaaacggcacc
agaggagaccctggtgatatgggaccaagaggagagcctgggcagcctggaccaaaggga
gatgctggaagacctggctttagctatcctggaccaagaggagatccaggcgaaagaggg
gacccgggcaagcgtggaccccctggyagcagaggagactgtggtcagaagggagatcct
ggaaataaaggaactccaggagagtcaggtgaaccagggcccacaggggaaccagggcta
agaggacccagaggaggtcctggtcgagatggagatccaggtccagagggagatcccggg
cttactgaatgtgatgtcatgaactacatcagagagacgtgtggctgctgtgactgcgag
aaacgctgcggggccctggatatygtctttgttattgacagctcagagtctgtgggactc
accaacttcaccctggaaaagaactttgtcatcaacaccatcaacagactgggatctttt
gccaaagacccgcagtccgaaacaggcacaagggtcggtgtggtgcagtacagccacaat
gggaccttccaagcaatcaacctcaatgacagcaacatcaactcgctgacggcgtttaag
gaagctgtgaagcggttagagtggatcgcaggaggaacctggactccatctgctcttaag
tttgcctaygaccacctgatcagggacagccgccgagccaaagccaacgtcacggtcgtc
gtgattacggacggacgctttgacccaagggacgacgacagactgctgccgtatctgtgc
aatcacccgggcgtcgacgtgagtgccatcggtatcggggacatgtttgagcaggtcgag
gagaacgagagtctgcagagcattgcctgccagaaggaaggcagagtgatgggaatgagg
cggttcgcagacctggtggcggaggaattcatcgacaagattgagaccgtgctctgccct
gatccagccatcatatgccctgatcttccatgtaaatcagagccagctgtggctagttgt
gtgcagaggccggtggacgtgatcttcatgttggatggttcggagaggatgggcctggag
aaccacctccgggccaaagagttcatygagaacgtagcccgccgcctgaccctggccgac
ggcccgacygacgacaccaaggcccgtctagctctgctgcagtttggcagcacgggagac
cacaaagaagagttcccgctcacgcataatctcaccgtcatcgtggattcgctggcagct
gtgaactatttggactcctcgtccgctttgggcaacgccatcatctatgctgtaaacaac
ctggtggtcagacagagtcaacggctatcccgacgcaacgctgaggtggccttcatcttc
atcacggatggaataacctccaccgaccagctggaagagggcgtggaggccatgaagaga
gtagaaggtgttcccacggtgatcgctttgggaggcgacactgacgaagaggtgctgcgc
aaggtgtcactgggagactcatctgccatctttaggggcgacaacttcttcgtgctgggc
aaatctgctttctttgagcgcttcatccgctggatttgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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