KEGG   Poecilia reticulata (guppy): 103479469
Entry
103479469         CDS       T05149                                 
Symbol
col8a1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
  KO
K23455  collagen type VIII alpha
Organism
pret  Poecilia reticulata (guppy)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 103479469
NCBI-ProteinID: XP_008432125
Position
LG2:17159361..17171560
AA seq 767 aa
MRACVQKVEAKLTDECDGGESSSLALVMPPLLRPLATVLLQLVVFISVTGGAYYGHTQHP
QPYQPMHHLQHINMGKGGFPQQQYLGKEVPYMQFPHYRKELPQTPLLKGKENPRKGGNYN
AGKDNGLTIPSAVEGAALREQGPAGPPGPEGPPGPPGDGLPGPEGQLGPPGPPGLPGIGK
LGLPGVPGKPGVIGEPGPQGKMGPRGEEGPTGQPGPQGPSGPPGLPGIGKPGMQGLPGQP
GGKGEPGHKGLPGLPGLPGPKGDKGMGLPGQPGHKGLPGPPGPAGPRGLPGFGKPGLNGL
PGPQGPPGHKGHSGESGLPGPAGKGGPPGPPGLPGQGKPGQNGLPGEPGRTGEKGPTGPP
GLPGKPGLPGFGKQGLSGPKGDKGMNGPPGPPGLKGDKGHGGLPGMLGPPGPSGPSGPPG
PIGRPGSVGAPGSKGDCGDGGPKGLDGAKGDLGPPGLPGKTGLTGDLGEPGPRGPPGPSG
PKGADGYKGLPGIPGPPGTPGLRGVAGLPGEKGIQGSQGIPGIDGTAGPMGSPGPTGPKG
ENGLPGPPGTAVIGSPGLPGPAGPQGREGLSGLPGQPGQPGPPGPPGPPGEPVFSPEMAG
VLSEMGPGLDGIKAGSYGKKSKYGGGGAEVMGSSGLEMPAFTAVASTPFPPVGSPVVFDK
LLYNGRQNYNPQTGIFTCDIPGIYYFAYHIHCKGENVWVALMRNNEPVMYTYDEYKKGSL
DQASGSAVLPLQPGDTVYIQMPSDQASGLYAGEYVQSSFTGYLLYPM
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgcgtgcatgtgtgcagaaagttgaagccaaactgacagatgaatgcgacgggggcgag
agcagcagtttggctttggtcatgcctccccttcttaggcccctcgccactgttctgctc
cagcttgtcgtcttcatatctgtgactggtggtgcatactacggacacactcaacacccc
cagccgtaccagccaatgcaccaccttcagcacattaacatgggcaagggaggttttcct
cagcaacagtaccttggcaaagaagtgccctacatgcagtttccacactacaggaaggag
ctgccccagacccccctgctcaaaggcaaagaaaatcctcggaaagggggaaactacaat
gctggcaaagacaacggtctaacaattcctagtgcagtggaaggagctgccctgagagaa
caaggcccagctggaccacctggaccagagggacctccagggcctccaggagatggtttg
cctggtcctgaaggccaactgggacctccaggtccaccaggactgcctggaatagggaaa
ctaggcttgcctggagtgccaggaaaaccaggtgtaattggtgagcctgggcctcaggga
aaaatgggacccagaggtgaagaaggccccactggtcaaccaggtcctcagggaccctcg
ggcccacctgggcttcctggaataggtaaaccagggatgcagggattaccaggacaacca
ggtggcaaaggagaaccaggtcacaagggcctgccaggactgccgggattaccgggacca
aaaggagacaaaggaatgggccttccaggacagcctggtcacaaaggacttcctgggcct
cctggaccggctggcccaagagggctgccaggttttggaaaaccagggttgaatggtttg
ccaggtccacaaggaccaccaggacataaaggacattctggggaatcagggcttcctggg
ccagctgggaaaggaggaccacctggccctccaggtctacctggtcaaggaaagccaggt
caaaatggtctgcctggagaaccaggaaggacaggtgaaaagggccctacaggaccacca
ggattgccaggaaaaccaggacttccaggatttggtaaacaaggactttcaggaccaaaa
ggtgataaaggaatgaatggaccacctgggcctccaggactcaaaggagataagggccat
ggcggattacctggaatgcttggacctcctggaccaagtggtccatcaggtcctccagga
cctattggacgacctggaagcgtaggtgcacctggttccaaaggagattgtggagacgga
ggacctaaagggcttgatggggccaaaggtgaccttggtcctccagggcttcctggtaag
actggtctaactggggaccttggggaaccaggtcctagaggtccacctggaccaagtggt
cctaaaggtgctgatgggtataaaggtctacctggtatacctggtcccccgggaactcct
ggtttaagaggagtggctggattacctggtgaaaagggtattcaaggatctcaaggaatc
cctggaatagacggtacagctggaccaatgggatctccaggtcccacaggacctaaagga
gaaaatggacttcctggtccaccaggcactgcagtcattgggagtccaggcctgcctggt
cctgcaggaccccaaggaagagagggattgtctggactcccaggacagccaggtcaacct
ggtccacctggaccaccaggaccacctggtgaacctgttttctctccagaaatggctggg
gttctctctgagatgggaccaggactagatggtattaaagccggaagttatggcaaaaag
agcaaatacggtggaggtggtgctgaagtaatgggttccagtggacttgaaatgccagca
tttacggctgtagcgtccactcccttcccacctgtggggagtccggttgtttttgataag
ctgttgtacaacggccgccaaaactacaatcctcagacaggaatcttcacctgtgacatc
cccggcatttactactttgcctaccacattcattgcaagggagagaacgtgtgggtggct
ttgatgagaaacaatgagcctgtgatgtatacatatgatgaatacaaaaaaggttcctta
gaccaagcctctggaagtgcagtcctgcctctccaacccggggacactgtgtatattcaa
atgccatcagatcaagcctcaggactttatgctggagagtatgtgcagtcctcctttact
gggtatttgctctatccaatgtaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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