KEGG   Poecilia reticulata (guppy): 103480164
Entry
103480164         CDS       T05149                                 
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like isoform X1
  KO
K15516  fragile X mental retardation protein
Organism
pret  Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:pret00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pret03019]
    103480164
Messenger RNA biogenesis [BR:pret03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     103480164
   Factors involved in mRNA localization
    Other mRNA localization factors
     103480164
   mRNA cycle factors
    Stress granule specific factors
     103480164
SSDB
Motif
Pfam: FXMRP1_C_core KH_9 Tudor_FRX1 FXR_C1 KH_1 Agenet DUF150_C
Other DBs
NCBI-GeneID: 103480164
NCBI-ProteinID: XP_008433246
Position
LG18:3267496..3288273
AA seq 672 aa
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYQKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNSP
ASRNTFHKITIPVPEDLRDICASDDIHKDFRKAIGANCIFYSAQTHELIVLSTNDTTVKR
ATLLSDMHFRSIRTKLILMSRNEEATKHLETSKQLAAAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQAREYLEFKEDYFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTASSKEGMVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAAPSRPAGPAGPGGDREKGYM
TDESSNSLHASRTYGGRGRGRRASNTQYSGYGTNSELSNASESEDVNDRELRPRGIGGDE
RGSRRGGRGRGANSGRGRGGPAAKPSNSISSVLRDPDSNPYALLEGEGELADADLSEGMA
GDRHRRSRRRRNDQEPSVMDAATESDNQAGPSENGLDEEARPQRRNRSRRRRNRGSRPEG
GSASRDRQPGESVTVADYISRPESQSRQNLPQKENHSGPEPKENGTSAKKEERTPSKRSP
SKETPTLVNGVS
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggacgggctggccgtggaggttcgcggctcgaacggggccttctacaagggttttatc
aaagatgtccatgaagactcactcactattgtatttgaaaacaactggcagcctgagaga
cagctgccgttcagtgacgtgcggctgcctcctccagccgactaccagaaagacatcggc
gaaggcgaggaggtggaggtctactccagggccaacgaacaggagccgtgcgggtggtgg
ttagcacgggtcaggatgatgaagggggagttttacgtaattgaatacgcagcttgcgat
gccacatacaacgagattgtcacatcggagcgcatcaggcctctgaaccccaacagtccc
gcctctcgaaacactttccacaagatcaccatccctgtcccggaagacctgagggacata
tgtgcaagcgatgacattcacaaagacttcagaaaagctatcggagctaactgcatcttc
tacagcgctcaaacacatgagctcattgtcctgtctacaaacgacacaacggtaaagcgt
gcaacactcctgagtgacatgcatttccgcagcatccgcaccaagctcatcctaatgtcc
cgcaacgaagaagccaccaaacatttggagaccagtaagcagctagcagcagcgtaccag
gaagaggtcagagtcagagaggacctgatgggcctcgccatcggctcccacggtgccaac
atccagcaggccaggaaggtgcctggagtgacggccatcgagctggaggaggagagctgt
accttcaggatctacggagagactcctgaggctgtgaagcaggcgagagaatatctggag
ttcaaagaagactacttccaggttccccggaaccttgtaggcaaagtcatcggaaagaat
ggcaaagtcatccaggagatagtggacaagtcgggcgtggtccgcgtccggatcgaggga
gacaacgacaaaaagcttccccgggaggaggtaggcaggcagggggctggcagagacgac
actgccagcagcaaagagggcatggttccctttgtgtttgttggaactaaggaaaacatc
agcaatgctcaggccttgttggagtaccatgtgtcctacctgcaggaggtggagcagctg
cgcctcgagcgcctccagattgacgagcagctccgtcagatcggagtgggataccgcgcg
gcccccagccggcccgctggccccgcagggcccggtggcgaccgggagaaaggttacatg
acggacgagagcagcaactctctacacgcctcgcgtacgtacggcgggcgtggccgagga
cgaagagcctccaacacccagtactctggatacggcacaaactccgaactgtcaaatgct
tccgagtcggaggacgtcaacgaccgcgaactgaggccccgtggcatcggtggggacgag
agaggctccaggcggggaggcaggggccgaggtgcaaactcaggacgggggcgcggtggc
cctgcagccaagccctccaactcaattagctcagttctgagggatccagacagcaacccg
tacgctctgctggagggagagggcgagctcgcagacgccgacctcagtgagggcatggca
ggggaccgccacagacgctcccgccggcgccgtaacgaccaggagcccagcgtgatggac
gccgccacagagtcggacaatcaggctggccccagtgagaacggactagacgaagaagct
cgacctcagcgtcgcaaccgaagccgccggcgccgtaaccgtggcagccggccagaggga
gggtcggccagtcgtgacagacagccgggagaaagtgtgaccgtagccgactacatatcc
cgtcctgagtctcagagccgacagaacctgcctcagaaggagaaccactctggacctgaa
cccaaggagaacggaaccagtgcaaagaaggaggagcgaacgccctcgaagcgttctcct
agcaaagagacaccgactttggtcaacggggtctcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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