KEGG   Pseudomonas rhizosphaerae: LT40_12630
Entry
LT40_12630        CDS       T03339                                 
Name
(GenBank) geranylgeranyl pyrophosphate synthase
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
prh  Pseudomonas rhizosphaerae
Pathway
prh00900  Terpenoid backbone biosynthesis
prh01100  Metabolic pathways
prh01110  Biosynthesis of secondary metabolites
Module
prh_M00364  C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:prh00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    LT40_12630
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:prh01006]
    LT40_12630
Enzymes [BR:prh01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     LT40_12630
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     LT40_12630
    2.5.1.29  geranylgeranyl diphosphate synthase
     LT40_12630
Prenyltransferases [BR:prh01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   LT40_12630
SSDB
Motif
Pfam: polyprenyl_synt DUF883
Other DBs
NCBI-ProteinID: AIS18185
UniProt: A0A089YWQ3
Position
complement(2786587..2787492)
AA seq 301 aa
MTADTPATSDTGFTEHMALLRHTIESRLDALLPVASNERDLVATAMRDGALAPGKRMRPI
LLILASNGLGASDQAALDLGCAVEMVHAASLVLDDMPCMDNAKLRRGRVTTHLAYGEDVA
ILAAVALLSRAFAVVAGIEGLKPSIRTQLVEIMANAIGAHGLARGQLQDLRDGLHPRTAE
EIAATNNLKTGVLFSAIMDMAYLISDAPPPTRAVLQCFALELGQAFQLYDDLHDHSPGTA
KDQGKDDGKSTFMALCGEDEVKRRLQEHLDKARACLADAYAQDDYISRFLQLIFVKAVTC
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacagctgatacgcccgcgaccagcgataccggtttcaccgagcacatggctttgctg
cggcacaccatcgagtcgcgtctggacgccttgctgccggtagcgagcaacgagcgcgac
ctggtggccacggcgatgcgcgacggtgccctggcaccgggcaagcggatgcgtccgatc
ctgttgatcctggcctcgaacggcctgggcgccagtgatcaggctgcgctggacctgggc
tgtgcggtggaaatggtgcacgccgcctccctggtgctcgacgacatgccgtgcatggac
aacgccaagctgcgtcgcggtcgtgtcaccacgcacctggcctatggcgaggacgttgcc
attctggcggcggtggcgctgttgtcccgagcgtttgcggtggtggcgggtatcgagggg
ctcaagccctcgatccgtacccaactggtcgaaatcatggcgaatgccatcggcgctcat
ggcctggcccgtggtcagttgcaggacctgcgcgacggcctgcatccacgcaccgccgaa
gaaatcgccgccaccaacaacctcaagaccggggtgttgttcagcgcgatcatggacatg
gcctatctgatcagcgatgcaccgccccctacgcgcgctgtgctgcaatgcttcgccctg
gagctggggcaggctttccagctgtacgacgatcttcacgaccacagcccaggcacggcc
aaggatcaaggcaaggacgatggcaagtcgaccttcatggcgttgtgtggtgaagatgaa
gtgaagcggcgcttgcaggagcacctggacaaggcgcgcgcttgtctggccgatgcctat
gcgcaggacgattacatcagccgctttctgcaactgatattcgtcaaggccgtcacctgc
gcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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