KEGG   Pseudomonas rhizosphaerae: LT40_14525
Entry
LT40_14525        CDS       T03339                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
prh  Pseudomonas rhizosphaerae
Pathway
prh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:prh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LT40_14525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prh03400]
    LT40_14525
Enzymes [BR:prh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LT40_14525
DNA repair and recombination proteins [BR:prh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LT40_14525
SSDB
Motif
Pfam: PriA_C PriA_3primeBD DEAD ResIII PriA_CRR Helicase_C TF_Zn_Ribbon AAA_30 AAA_25 zinc-ribbons_6 PriA-like_WH AAA_19 AAA_16 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AIS18533
UniProt: A0A089YQ14
Position
3223823..3226042
AA seq 739 aa
MPDVILRLALPSPLRRLFDYKAPAHTAQTVFTPGMRLRVPFGRREMIGILVEVVSHSEVP
ADKLKPAIALLDPVSPLPPALFKLCLWTSQYYQHGLGDTLSWALPVLLRQGEPAEARQER
FWHAAADARLDDPRIARAPKQRDALKTLAQHPHGVAHQLLSKLQLNKDSLDLLLAKQLVS
VEVRRHGPGPRAEHWLAQPELPLNEEQRAAFEAIRASLGGFQPFLLAGVTGSGKTEVYLQ
LIHECLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRDRLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRASQEDIPIVLGS
ATPSLESLHNAHTGRYGLLRIDHRAGGAQQPKFLRLDVKSRPLDSGISGPMQQAIGQTLA
NGQQVLVFLNRRGFAPTLLCHDCGWLSECPRCDARTTVHQRSGELRCHHCGHVERVPRQC
PKCGTVDLRPVGAGTERAEERLAILFPDYPVLRVDRDSTSRKDAMTQLFATIQKGHPCIL
IGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLVQLTEQGYFAFAEQALAERRAAGLPPFAHLALLRAEAHKPGQAEAFLDEA
CAAAEALVAQLALGGLELLGPVPAPMERRAGRYRAQLLVQATLRAPLHRLLNAWMLQLEQ
LPSGRQVRWSLDVDPVDLY
NT seq 2220 nt   +upstreamnt  +downstreamnt
gtgcccgacgtcatcctgcgcctcgccctgccctcgccgctgcgacgcctgttcgactac
aaggcgccggcccacacggcacagaccgtgttcaccccaggcatgcgcctgcgggtgccg
ttcgggcggcgggagatgatcggtatactggtcgaggtggtcagccacagcgaggtgccg
gccgacaagctcaagccggccattgccctgctcgatccggtcagcccgctgccgcctgcg
ctgttcaagctgtgcctgtggacctcgcagtactatcagcacggcctgggcgacaccctg
agctgggcactgccggtgctgctgcgccagggggagccggccgaggcccgccaggaacgc
ttctggcacgccgctgccgatgcgcgcctggacgacccgcgcatcgcccgcgcacccaag
cagcgcgacgccctcaagaccctggcccagcatccccatggcgtggcgcatcagctgttg
agcaagctgcagttgaacaaggacagcctcgacctgctgctggccaagcaactggtcagc
gtcgaagtgcgccgccacggccccggcccacgcgcggaacactggctggcgcaaccggaa
ctaccactcaacgaagagcaacgcgccgccttcgaggcgatccgcgccagcctgggtggc
ttccagccgtttctccttgcgggggtgaccggcagcggcaagaccgaggtgtacctgcaa
ctgattcacgaatgcctggaggccggcaagcaggccctggtattgatcccggaaatcaac
ctggggccgcagaccctggcgcgcttcgagcagcgcttcaatgcgcgtattgcgctggtg
cactcggcggtcaacgatcgtgatcgcctggacgcctggctggccgcccgcgatggcgag
gccgacattatcatcggtacccgctcggcgctgttcacgcccatgaagaaccccgggctg
atcatcatcgacgaagaacacgacggctcctataaacagcaggaaggcctgcgctaccac
gcacgcgacctggccctggtgcgcgccagccaggaagacattcccatcgtcctgggctcg
gccacgccgtccctggaaagcctgcacaacgcccacaccgggcgctacggcctgttgcgc
atcgatcaccgcgccggtggcgcccagcaacccaagttcctgcgcctggacgtgaagagc
cgccccctggacagcggcatcagcggcccgatgcagcaggccataggccagaccctggcc
aacggccaacaggtgctggtgtttctcaaccgccgcggcttcgcacccacactgctgtgc
cacgactgcggctggttgtccgaatgcccgcgctgcgatgcgcgcacgaccgttcaccag
cgctcgggcgaattgcgctgccatcactgcgggcatgtcgagcgcgtgccgcgccagtgc
cccaagtgcggcacggtggacctgcggccggtgggcgcgggcaccgagcgcgccgaggaa
cgcctggcgattctgtttcccgactacccggtactgcgcgtcgaccgcgacagcacctcg
cgcaaggacgccatgacccagctgttcgcgaccatccagaagggccatccgtgcatcctg
atcggcacccagatgctggccaaggggcaccactttccacgagtcaccctggtgtcgatc
ctcgatgccgacggtgggctgttctccggcgacttccgtgccagcgagcgcatggcgcaa
ttgatcgttcaggtggccggccgcgccgggcgcgcggaagaaccgggcaaggtgatcatc
cagacgcacctggccgaccatccgctgctggtgcaactgaccgagcagggatatttcgcc
ttcgccgagcaggccctggccgaacgtcgcgccgccggcctgccgccgttcgcgcacctg
gcgctgttgcgcgccgaggcccacaagccgggccaggccgaagcctttctggatgaagcc
tgcgccgccgccgaagccttggtggcgcagcttgcactgggcggcctcgaactgctgggg
ccggtgcctgcgcccatggagcgccgcgccggacgctaccgggcgcaactgctggtgcag
gcgacgttgcgcgcaccgctgcaccgcctgctcaatgcctggatgctgcaactggaacaa
ctgcccagcgggcgacaggtacgctggtcgctggatgtggacccagtggatttgtattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system