KEGG   Pseudomonas rhizosphaerae: LT40_15440
Entry
LT40_15440        CDS       T03339                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
prh  Pseudomonas rhizosphaerae
Pathway
prh00250  Alanine, aspartate and glutamate metabolism
prh00310  Lysine degradation
prh00350  Tyrosine metabolism
prh00650  Butanoate metabolism
prh00760  Nicotinate and nicotinamide metabolism
prh01100  Metabolic pathways
prh01120  Microbial metabolism in diverse environments
Module
prh_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:prh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    LT40_15440 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    LT40_15440 (gabD)
   00310 Lysine degradation
    LT40_15440 (gabD)
   00350 Tyrosine metabolism
    LT40_15440 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    LT40_15440 (gabD)
Enzymes [BR:prh01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     LT40_15440 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     LT40_15440 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     LT40_15440 (gabD)
SSDB
Motif
Pfam: Aldedh
Other DBs
NCBI-ProteinID: AIS18702
UniProt: A0A089YWA9
Position
3413228..3414688
AA seq 486 aa
MLKHSLRDPSLLVEQAYANGQWIDADDGATLAVTNPADGSTIAHVPALQGAETQRAIAAA
EACFTTWRQVPAAERAKLLEKWYQLIMDNQEDLALIMTAEQGKPLTESRGEIAYGASFVK
WFAEEARRIYGDTIPSPAADRRILVLKQPIGVVAAITPWNFPNAMITRKCAPALAAGCPV
LVKPSEMTPLSALALAVLAERAGIPAGVFNVLTGMPAGVGGEMTSNPAVRKLSFTGSTRV
GQLLMSQCASTIKRLSLELGGNAPFIVFDDADLDLAIAGVMQSKFRNAGQTCVCANRILV
QDGIYARFAERLKAAVAELKVGDGLAEGVTIGPLINAAAVDKVARHISDAVEKGASVAIG
GLPQNDGLYVQPTVLLDANADMLLAGEETFGPVAPLFRFHTEEEALALANATPYGLGAYY
FTQDMRRAWRVGERLEFGMVGLNTGIISMEVAPFGGMKQSGTGREGSKYGLDEFLEVKAW
HIGGLG
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgttgaagcattcactgcgtgacccttccctgctcgtcgagcaggcctacgccaacggc
cagtggatcgatgccgatgacggcgccaccctagcggtgaccaaccccgccgatggcagc
accatcgcccacgtcccggccctgcagggcgccgaaacccaacgcgcgatcgcggcggcc
gaagcctgtttcaccacttggcgccaagtcccggcggccgagcgcgccaagctcctggaa
aagtggtaccaactgatcatggacaaccaggaagacctggccctgatcatgaccgccgaa
caaggcaagcccttgaccgagtcgcgcggcgaaatcgcctacggcgccagcttcgtcaaa
tggttcgccgaggaagcccggcgcatctacggcgacaccattccgtcgcccgctgccgac
cgacgcatcctggtgctcaagcaaccgatcggcgtggtcgcggcgatcaccccgtggaat
ttccccaatgccatgatcacccgcaagtgcgcgccggcattagccgccggctgcccggtg
ctggtcaagccctcggagatgaccccgctgtcggccctggccttggctgtgctagccgag
cgcgcgggcattccggccggggtgttcaacgtgctcaccggcatgccggcgggcgtgggt
ggcgagatgaccagcaacccggcggtgcgcaaattgtcgttcaccggttccacccgcgtg
ggccaactgttgatgagccagtgcgcctcgaccatcaagcgcctgagcctggaactgggc
ggcaacgcgccgttcatcgtgttcgacgacgccgacctggacctggccatcgccggggtc
atgcagagcaaattccgcaacgccgggcagacctgcgtgtgcgccaaccgcatcctggtg
caggacggcatctatgcccgttttgccgagcgcctgaaggcggccgtggccgagctgaaa
gtcggcgatggtctggccgagggcgtgaccatcggcccattgatcaatgcggcagcggtg
gacaaggtggcccgccacatcagcgacgcggtggagaaaggcgcgagcgtggccatcggc
ggattgccgcaaaacgacggcctgtacgtgcagcccacggtgttgctggacgccaacgcc
gacatgctgctggccggtgaggaaaccttcggcccggtggcgccgctgttccgctttcat
accgaagaagaagccctggctctggccaacgccacgccctatggcctgggcgcctactac
ttcacccaggacatgcgccgcgcctggcgcgtgggcgagcgcctggagttcggcatggtg
ggcttgaacaccgggatcatttccatggaggtggcgccgttcggcggcatgaagcaatcg
ggcaccggccgcgagggttccaagtatggcctggatgaattccttgaagtgaaggcctgg
catatcggtgggttgggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system