KEGG   Pseudomonas rhizosphaerae: LT40_20070
Entry
LT40_20070        CDS       T03339                                 
Name
(GenBank) ligand-gated channel protein
  KO
K16090  catecholate siderophore receptor
Organism
prh  Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:prh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:prh02000]
    LT40_20070
Transporters [BR:prh02000]
 Other transporters
  Pores ion channels [TC:1]
   LT40_20070
SSDB
Motif
Pfam: TonB_dep_Rec Plug
Other DBs
NCBI-ProteinID: AIS19559
UniProt: A0A089YVB6
Position
complement(4449809..4452118)
AA seq 769 aa
MNRQHPIIPGSSPRLLASAIGMALGATCAVQTAHAAAADEAKAASVSLGATSITGEAQEP
TSYQAERASSTKYTAPLVDTPRSVTVVPQQVIKDTGALNLQDALRTVPGITFGAGEGGNP
QGDRPFIRGFDAQGDTYLDGVRDAGAQSREIFAVESIEVSKGPNSAIGGRGAAGGTINLV
SKKAHLGDSLDGGFTWGSDQTQRYTLDGNYQFSDSAAGRLNLMSHQSNVAGRDQVDYDRW
GIAPSLAFGLGTDTRVFLDYYHLESDDLPDSGIPYSIPAAGNAGRTSANPDKPQDGGRSS
NFYGLSDRDFRKTRSDISTFAIEHDLTDALTVKNTLRHGNTMQDYILTQPDDSQRNVNNG
SVWRRANSRVGNTATTTNQTDLFGDFYVGGFKNSFSTGIEFSREDSDRSSYTVNTDTTPR
TAGASSNCSLGSIASSGYNCTSLANPNPDDPWNGAIARNYAGTDTSSKTRAIYVFDTLEL
SPQWQVNAGLRYDHFETDYRTYTAAGATTAKSEDTSEFVTGQLGLVWKPAENGSVYVSYA
TSATPPGALVGEGMEGNPLGGAPDRTGNLLSSDLEPEETTNYEIGTKWDLLDQRLSLTAA
LFRTEKDNTRVQTNTYSYENAGKTRVDGLELSASGKLTEQWQVFAGYSYLEARVVDNGPL
GAANNGNQMPNTPNNSASLWTTYQLTPKLTIGGGAFYVDDVFGNLANTTLVNSYVRLDAM
ASYKINKHFDVQLNVQNLADKTYYDKAFSTHFANQAAGRTALLSTNFHF
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgaaccgccaacatccaatcattccgggctcatcgccacggctgctcgcctctgccatc
ggcatggccctaggcgccacgtgcgccgtgcaaacggcacacgccgctgccgccgacgaa
gccaaggccgcttcggtatcgctgggagccaccagcatcaccggcgaagctcaggagccg
acgtcctatcaggccgaacgtgcctcctccaccaagtacaccgcgcccttggtcgatacc
ccgcgctcggtgacggtggtaccgcaacaggtgatcaaggacaccggcgcgctcaatctg
caggacgctttgcgcaccgtgcccggcatcacctttggcgccggtgaaggcggtaaccca
cagggtgaccggccgttcatccgcggcttcgatgcccagggcgatacttatctggatggc
gtgcgggatgccggcgcgcagagccgcgaaatcttcgcggtggaatccatcgaggtcagc
aagggccccaactcggccatcggcggccgtggcgctgcgggcggcaccatcaacctggtg
agcaagaaagcgcatctgggcgactcgctggacggtggcttcacctggggctcggaccag
acccagcgctatacgctggacggcaactaccagttcagcgacagcgctgccggacgcctc
aacctcatgagccaccagagcaacgtggccggacgcgaccaggtcgactacgaccgttgg
ggcattgcgccttccctggccttcggccttggcaccgatacgcgggtcttcctcgattac
taccacctggaaagcgatgacctgcccgattcggggattccctacagcattccggccgcg
ggcaacgcggggcgtacctcggccaatccggacaagccccaggacggcggccgcagcagc
aacttctatggcctgagcgaccgtgatttccgcaagactcgcagcgacattagtaccttc
gccatcgagcacgacctcaccgacgccttgaccgtgaagaacaccctgcgccacggcaat
accatgcaggactacatcctcacccagcccgacgacagccagcgcaacgtcaataacggc
agtgtctggcgccgtgccaacagccgcgtcggcaataccgcgaccaccaccaaccagacc
gacctgttcggcgatttctatgtgggtggattcaagaacagcttctcgaccggtatcgag
ttcagccgcgaggacagcgaccgcagcagctacaccgtcaataccgacaccacgccacgg
accgccggtgccagcagcaactgcagcctcggcagtatcgcttccagtggctacaactgc
acctcgctggccaaccccaacccggacgatccgtggaacggcgccattgcccgcaactac
gccggcaccgacacgtcgagcaagacgcgggcgatctacgtgttcgacacgctggagctg
agcccgcagtggcaagtcaacgccggcctgcgctacgaccatttcgaaaccgactaccgc
acctacaccgccgccggtgccaccacggccaagagcgaggacaccagcgagttcgtcacc
ggccagctgggtctggtgtggaagccggccgaaaacggcagcgtctatgtgtcctatgcc
acgtccgccacgccgcctggtgcgctggtcggtgaaggcatggaaggcaacccgttgggg
ggtgcgcccgaccgcacgggcaacctgctgagcagtgacctggagccggaggaaaccacc
aactacgaaatcggtaccaagtgggacctgctcgaccagcgcctgtcgctgaccgccgcg
ctgtttcgtaccgagaaggacaacactcgggtacagaccaacacctacagctacgagaac
gccggcaagactcgcgtcgacggcctggagctgtcggcctcgggcaagctcaccgagcag
tggcaggtgttcgccggctacagctacctcgaggcgcgggtggtggacaacgggccgctg
ggcgccgccaacaatggcaatcagatgcccaatacgccgaacaacagcgccagcctgtgg
accacctatcagctgacgcccaagctgaccatcggtggcggcgccttctacgtcgacgac
gtgttcggcaacctcgccaacaccaccttggtcaacagctatgtgcgcctggatgccatg
gccagctacaagatcaacaagcacttcgacgtgcagttgaacgtgcagaacctggccgac
aagacctattacgacaaggctttcagcacccacttcgccaaccaggcggcgggacgcacg
gcactgttgagcaccaacttccacttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system