KEGG   Paenibacillus riograndensis: PRIO_0737
Entry
PRIO_0737         CDS       T03849                                 
Symbol
ddl1
Name
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pri  Paenibacillus riograndensis
Pathway
pri00470  D-Amino acid metabolism
pri00550  Peptidoglycan biosynthesis
pri01100  Metabolic pathways
pri01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pri00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PRIO_0737 (ddl1)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PRIO_0737 (ddl1)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PRIO_0737 (ddl1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pri01011]
    PRIO_0737 (ddl1)
Enzymes [BR:pri01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PRIO_0737 (ddl1)
Peptidoglycan biosynthesis and degradation proteins [BR:pri01011]
 Precursor biosynthesis
  Amino acid ligase
   PRIO_0737 (ddl1)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp GARS_A ATP-grasp_4 ATP-grasp_3
Other DBs
NCBI-ProteinID: CQR52298
UniProt: A0A0E4CUK2
Position
I:821638..822729
AA seq 363 aa
MGDTKITVGLVYGGKSGEHEVSLQTAFAVMNAFDYAKYEIIPFYISKQGLWKVGAAMDAP
FGTIQELKLGGEAGDMSMALNAVFSGLTGGDQLIDVMFPLLHGTNGEDGTIQGLFEMANI
PYIGAGVLASSAGMDKVVMKKLFGEAGLDQCEYCYFNISAWKRKSHELIISLEDKLGYPV
FVKPANLGSSVGISKAVDKESLIKAVEVAFRYDTKVIIEEFVDAREVEVSVLGNEEPEAS
VPGEIVSSGEYYDYAAKYTDGKSQMLIPAPVDPEVADRLRESAIQAFRAIEGSGITRADF
FLRKSDGKILINEVNTMPGFTPYSMYPLLWRETGVSYQALLDRMIELALERYHFKQNLKY
DNE
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgggggatacaaaaataaccgtaggactggtgtacggcggcaaatccggagagcacgag
gtatcgctgcagacggcatttgcagttatgaacgcttttgactacgcgaaatatgagatt
atacctttttatatttccaagcaggggctttggaaggtcggagcggcgatggatgcccct
tttggaactatccaggaactgaagctgggcggcgaagccggagatatgagtatggcactg
aatgcggtgttcagcgggctgaccggcggtgatcagctgattgatgtgatgttcccgctg
ctgcacggcactaacggagaagacgggacgattcagggcctgttcgaaatggctaatatc
ccttatatcggggcgggtgtcctggcgtcgtctgcaggcatggataaagtggtcatgaag
aagctgttcggagaggccgggctggatcagtgtgaatactgctatttcaatatcagcgcc
tggaaacgcaaaagccatgagctgatcatcagcctggaggataagctgggttatccggta
ttcgtcaagccggccaatctgggctccagtgtaggcatttccaaagcggttgataaggag
agcctgattaaggcggtggaggtggccttccgctatgataccaaggtcattattgaagaa
tttgttgatgcgcgcgaggttgaagtcagtgtgctcggcaatgaggagccggaagcttcg
gttccgggtgaaatcgtctcttctggtgaatattatgattatgcggcaaaatacaccgac
ggcaaatcgcagatgctgattccggcccctgtggaccctgaggtggctgaccgtctgcgg
gagtcggcgattcaggcgttccgggcgattgagggcagcggcattacgcgcgccgacttc
ttcctgcgcaaatccgatggaaagattctcattaatgaagtgaatacaatgcccggtttc
acaccttacagcatgtatccgctgctgtggcgcgagaccggcgtatcgtatcaggccctg
ctggaccgcatgatcgagctggcgctggaacgttaccatttcaagcaaaatctgaagtac
gataacgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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