KEGG   Providencia rustigianii: NCTC6933_03332
Entry
NCTC6933_03332    CDS       T06047                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
prj  Providencia rustigianii
Pathway
prj02020  Two-component system
prj02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:prj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NCTC6933_03332
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NCTC6933_03332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prj03021]
    NCTC6933_03332
Transcription machinery [BR:prj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC6933_03332
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID SHNi-TPR Tenui_NS3
Other DBs
NCBI-ProteinID: VEB75004
Position
1:3285302..3286747
AA seq 481 aa
MKQSLQLRVSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALETNPLLEQEEQSPELDNLD
ILSSHTDSSEIDTKDALEKNDIPDELPLDADWDEIYTAGTPSGTSNDYSFDELPVYQGET
TQTLQDYLIWQANLTPFTDTDRAIATSIIDSIDESGYLTNTISEIHEGIDDPDISLEEVV
AVLKRIQHFDPLGVAAQDLKECLLIQLSLYPKETAGLQEARVIISDHIDLLANRDFRQLS
KLTRLKEDALKTAIDLILTLNPKPGQSINTGESEYVIPDVLVKKVSGHWQVELNTDSIPK
LSINNHYASMVNNSANESDSQYIRSHLQDAKWLIKSLESRHETLLKVATCIVEQQQEFFE
LGEEHMKPMILADIAYQVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVSTDTGGEAS
STAIRALVKKLVAAENPAKPLSDSKLTSMLAEQGIQVARRTVAKYRESLSIPPSNQRKQL
V
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgaagcaaagtttacagctcagagtcagtcaacaacttgcaatgacaccgcaattgcag
caggccattcgtctgttgcaactgtctacactcgagctgcaacaagaaatccaacttgct
cttgaaacaaatccgctacttgaacaagaagaacaatcccctgagctggacaacctcgat
atcttaagtagtcatactgacagcagcgaaatcgataccaaagatgccctcgaaaaaaat
gatatccccgatgaacttcctttagacgccgattgggatgagatttataccgctggcaca
ccatcgggaaccagtaatgactacagttttgatgagcttcctgtttatcaaggggaaacg
acgcaaaccctgcaagattacttaatttggcaggcaaatttaacaccatttactgatacc
gaccgagccatcgcgacgtccatcattgattccatcgacgaatcgggctacctcaccaat
accattagtgaaatccatgaaggtatcgatgatcccgacattagcttagaagaagtcgtg
gctgtcttaaaacgtatccagcactttgatccccttggtgtggcggctcaagatctcaaa
gagtgtttgttgatccagctatctttatatcctaaggaaaccgctgggttacaagaagct
cgtgtgattattagcgatcatattgatttgctcgccaaccgtgattttaggcaactaagt
aagctcactcgcctcaaagaagacgctttaaaaacggcaattgacctgatcctgacactc
aatcccaaaccgggtcaatccatcaatacgggtgaatcggaatatgttattcctgatgtg
ctggtgaaaaaagtcagtgggcactggcaagttgagttaaatacagatagcattcctaaa
ctaagtatcaataatcattatgcatcaatggttaataattcagccaatgaaagtgattcc
cagtatattcgcagtcacttacaagatgcaaaatggctgattaagagcttagagagccgt
catgagactctgctaaaagtggcgacttgtattgtagaacaacaacaagaattctttgag
ttaggcgaagagcatatgaaaccgatgattttggcagatatagcctatcaagtggatatg
cacgaatcgactatctcaagagtgacaactcaaaagtttctccatagtccacggggaatt
tttgagttgaagtattttttctccagccatgtgagtaccgacaccggaggagaagcctcc
tcaaccgccattcgtgcgctggtgaaaaaactggttgctgctgaaaacccagcaaaacca
ttgagtgacagtaaattgacgagtatgctggctgaacaaggtattcaagttgcccgtcga
actgttgctaagtatcgtgagtcgttatctattccgccatcaaatcaacgtaagcagttg
gtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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