KEGG   Pseudomonas aeruginosa RP73: M062_19695
Entry
M062_19695        CDS       T02711                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
prp  Pseudomonas aeruginosa RP73
Pathway
prp03410  Base excision repair
prp03430  Mismatch repair
prp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:prp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    M062_19695
   03430 Mismatch repair
    M062_19695
   03440 Homologous recombination
    M062_19695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prp03400]
    M062_19695
DNA repair and recombination proteins [BR:prp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     M062_19695
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     M062_19695
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      M062_19695
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: AGO41273
Position
complement(4227361..4229076)
AA seq 571 aa
MRIEPRPLPETLPDLGDLPPLLARLYAARGVRCAEELDKGLARLIPFQRLKGIEEGVALL
VDALEGGQRILIVGDFDADGATASSVGVLALRMLGAAWVDYLVPNRFEYGYGLTPEIVGV
ALEKRPDLLVTVDNGISSVDGVQAAKAAGLKVLVTDHHLPGPELPAADAIINPNQPGCEF
PSKAMAGVGVIFYVMLALRARLRELDWFARRGLKEPNLAELLDLVALGSVADVVPLDANN
RILVHQGLARIRAGRARPGLRALLEVAGRPPVRITSTDLGFILGPRLNAAGRLDDMSLGI
ECLLCDDEALARDMAVQLDQLNQDRKAIEQGMQREALAQLKELSLEQLPFGLCLFDADWH
QGVIGILASRLKERYHRPTIAFADAGDGSLKGSARSIPGFHIRDALDAVAARHPGLISKF
GGHAMAAGLSLPQENFGAFSAAFDAEVRRQLAEEDLAGRLLSDGQLSIQEFHLELARALR
QAGPWGQHFPEPMFHGVFQLVQQRIVGERHLKLVLKSECGSLQLDGIAFNIDREQWPNPT
VRWAELAYKLDVNEFRGQESVQLMIVHMAPR
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgcgtatcgaaccccgccccctgcccgaaaccctgcccgatctcggcgaccttccgcca
ttgctggcacgcctgtacgcagctcgtggcgtgcgttgcgccgaggagctggacaagggc
ctggcgcggctgattcccttccagcggctgaaaggcatcgaggagggcgtggcgctgctg
gtggatgccctggagggcggccagcggattctcatcgtcggcgacttcgacgccgacggc
gccaccgccagcagcgtcggcgtgctggccctgcgcatgctcggcgcggcctgggtcgat
tacctggtgccgaaccgcttcgagtacggctacggcctgaccccggagatcgtcggcgtg
gccctggagaagcgtcccgacctgctggtgacggtggacaacggcatctccagcgtggac
ggcgtccaggcggcgaaagccgcggggctcaaggtgctggtcaccgaccaccacctgcct
ggcccggaactgccggcggcggatgcgatcatcaaccccaaccagccgggctgcgaattc
cccagcaaggccatggccggggtcggggtgatcttctatgtgatgctggcgttgcgggcg
cgcctgcgcgagctggactggttcgcccggcgcgggctgaaggaaccgaacctcgccgag
ctgctcgacttggtggcgctgggcagcgtcgccgatgtggtgccgctcgatgccaacaac
cgcatcctggtccaccagggcctcgcgcgcatccgcgccggccgcgcccggccgggcttg
cgcgcgctgctggaggtggccgggcggcctccggtacggatcacctccaccgacctgggt
tttatcctcggtccgcgcctgaacgcggcgggtcggctcgacgacatgtccctcggcatc
gaatgcctgctctgcgacgacgaagcgctggcccgcgacatggcggtgcagctcgaccag
ttgaaccaggaccgcaaggccatcgagcagggtatgcagcgcgaggcgctggcgcagctc
aaggagctgagcctggagcaactgccgttcggcttgtgcctgttcgacgccgactggcac
cagggcgtgatcggaatcctcgcctcgcgcctgaaggagcgttaccaccggccgaccatc
gccttcgccgatgccggcgacggcagcctgaaaggctcggcacggtcgattcccggcttc
cacatccgcgacgcgctggacgcggtagccgcccgtcatcccgggctgatcagcaagttc
ggcggccacgcgatggctgccggactatcgttgccgcaggaaaacttcggcgctttctcc
gccgccttcgatgccgaagtacgccgccaactggccgaggaggacctggccgggcgcctg
ctctccgatggccagttgagcatccaggagttccacctggagctggcgcgcgcgttgcgc
caggccggtccctggggccagcactttcccgagccgatgttccacggggtgttccagctg
gtgcagcagcggatcgtcggcgagcgtcacctgaagctggtgctgaaaagcgaatgcggc
tcgctgcaactggatggcattgccttcaacatcgaccgcgagcagtggcccaaccctacc
gtgcgctgggccgagctggcctacaagctcgacgtcaacgaattccgcggccaggaaagc
gtgcaactgatgatcgtccacatggcccctcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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