KEGG   Prosthecochloris sp. HL-130-GSB: B9H02_05275
Entry
B9H02_05275       CDS       T04847                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
prs  Prosthecochloris sp. HL-130-GSB
Pathway
prs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B9H02_05275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prs03019]
    B9H02_05275
Enzymes [BR:prs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B9H02_05275
Messenger RNA biogenesis [BR:prs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B9H02_05275
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 EB1
Other DBs
NCBI-ProteinID: ARM30825
Position
complement(1094554..1095813)
AA seq 419 aa
MKTFSSLDIIDPIARALREEGYTTPTPIQAQAIPKILQGNDLLGCAQTGTGKTAAFAIPV
LQRLSSRPAPGRRKKIRSLVLTPTRELALQIGESFSAYGRHTGLANKVIFGGVGQKPQAD
ALRKGVDIVVATPGRLLDLMNQGHLHLKDIEIFVLDEADRMLDMGFIHDIRKILSALPEK
KQSLFFSATMPKEILSLAGSILHNPSKVTVTPVSSTVDTIDQQVYFVDKGNKNRLLVHLL
KNPDISTALVFTRTKHGADKVVKYLLRHDISAEAIHGNKSQNARQRALKNFKAQTTRILV
ATDIAARGIDVDDLEYVINYDLSNIPETYVHRIGRTGRAGAAGTALSFCNAEEKAYLRDI
EKLTSKTIPVIDHHPFPLTDHQPAAAVPQQGKQSNGRPGLKNRAKNSGRRWSVKTRKSR
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaaaacattcagttcactcgatattatcgatccgattgcgcgggcattgcgcgaggaa
ggatatacaactccaacccctatccaggcacaggcaataccgaagattctgcagggaaac
gacctgctcggctgcgcccagacgggaacaggaaaaaccgctgccttcgccatcccggtt
ctgcagcggctctcgtcacgcccggctcccggcagaagaaaaaaaatcaggagcctcgtc
cttaccccgacccgggaactcgcactgcagatcggcgagagcttcagcgcctatggccgg
cataccggcctcgccaacaaggtgatttttggtggtgtaggccagaaaccgcaggcagac
gcactgcgcaaaggggttgacatcgtcgttgccacccccggacgcctgctggacctcatg
aaccaggggcaccttcatctgaaggatatagaaatttttgtgctcgacgaagccgaccgc
atgctcgatatgggcttcattcacgacatccgcaaaattctctcagctctgccggaaaaa
aaacagtcactgttcttttcggccacgatgccgaaagaaattctctcgctggcaggctcc
attctgcacaacccctcgaaagtaacggtaacgcccgtatcgtcaacggtcgacaccatc
gaccagcaggtgtactttgtcgacaaaggaaataaaaaccgcctgctggtacacctcctc
aaaaatcccgatatctcgaccgcactggtattcacccgcaccaagcacggagccgacaag
gtcgtcaaatacctgctcaggcatgacatcagcgcagaggcgattcacggcaacaaaagc
cagaatgcaagacagcgcgcactgaaaaacttcaaagcgcagaccaccaggatcctggta
gcgacagacatcgcagcacggggtatcgatgttgacgatctcgagtatgtcatcaactac
gacctctccaacattcccgaaacctacgttcaccgtatcgggcggaccggacgggcagga
gctgcaggcacagcactctcattctgcaacgccgaagaaaaagcatatcttcgcgatatc
gagaagctgacatcgaaaacgattcccgtgatcgatcaccacccgttccccctcaccgac
caccagcctgccgctgccgtgccccagcagggaaaacaaagcaacggtcgcccggggctg
aaaaaccgggcaaaaaacagcggaagacgctggtcggtcaaaacaagaaaaagcagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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