KEGG T01212: PRU

Xylanibacter ruminicola: PRU_1562

Entry

PRU_1562          CDS       T01212

Symbol

rlmN

Name

(GenBank) 23S rRNA m2A2503 methyltransferase

K06941

23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]

Organism

pru Xylanibacter ruminicola

Brite

KEGG Orthology (KO) [BR:pru00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pru03009]
    PRU_1562 (rlmN)
Enzymes [BR:pru01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.192  23S rRNA (adenine2503-C2)-methyltransferase
     PRU_1562 (rlmN)
Ribosome biogenesis [BR:pru03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PRU_1562 (rlmN)

SSDB

Motif

Pfam:

RlmN_N Radical_SAM Fer4_12 DUF4144 Radical_SAM_2

Other DBs

NCBI-ProteinID:

ADE82368

UniProt:

D5ETA9

Position

complement(1860239..1861312)

AA seq 357 aa
MYDEKKVLLGMQPGELQQVVTELGMPKFTAAQIAKWLYQQHVGSIADMTNLSKANREKLA
EQYEVGSMAPIDCQRSVDGTIKYLFPTRSGKFVETVYIPERRRVGEQGSGIGDRATLCVS
CQVGCKMNCLFCQTGKQGFEGSLTAADILNQIYALPERDTLTNIVFMGQGEPMDNLDAIL
QATQVLTADWGYAWSPRRITVSSVGVKNKLKRFLDESECHVAISMHSPLPEQRQMLMPAE
KQMSITEVIDLLKQYDFSHQRRCSFEYICFAGLNDTTMHAREIVKLVRGLDCRVNLIRFH
EIPGVDLPGADEKRMEALRDYLTAHGVFTTIRASRGQDIFAACGLLSTAKKLSNSKS

NT seq 1074 nt +upstreamnt +downstreamnt
atgtacgacgaaaagaaggtattattaggcatgcagcctggcgaattgcagcaagtggta
accgaattgggaatgcccaagtttacggctgcacagattgccaagtggctctaccagcaa
catgttggtagcattgccgatatgaccaacctgtcgaaggcaaaccgtgaaaaactggcc
gaacagtacgaggtgggcagcatggcgcccatcgactgtcagcgttcggtggatggaacc
atcaaatatctgttcccaacccgtagtggtaagtttgttgaaacggtgtatataccagaa
aggcgacgggtaggcgagcaaggctcgggaatcggcgatcgcgccacgctgtgtgtatcg
tgtcaggtgggttgtaaaatgaattgcttgttctgtcagactggtaaacaggggtttgag
ggcagtttgactgctgctgatatcctgaaccagatatatgcgttgccagagcgcgacaca
ctgaccaatatcgtgtttatgggtcagggtgagcccatggataacctcgacgctatcctg
caggccacccaggtgctgactgccgattggggttatgcctggagtccgcgccgcatcact
gtatcgagtgtgggtgtgaagaacaagctgaagcgattcctcgacgagagtgagtgccac
gtggctatatcgatgcactcgccactgcccgaacagcgccagatgttgatgcctgccgag
aagcagatgtcgattaccgaggtgattgacctgctgaagcagtacgacttctcgcaccag
cgccgttgttcgttcgagtacatctgctttgccggactgaacgacaccaccatgcatgcc
cgcgagattgtgaagctggtgcgtggattggactgccgtgtaaatttgattcgattccac
gagattcctggtgtggatttgcctggtgccgacgagaagcgcatggaagccttgcgtgac
tatctcaccgcccatggtgtgtttaccactatccgcgccagtcgtggacaggatatcttt
gcagcctgtggtctgctgagtacggccaagaaattgtcaaatagtaaatcgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (93)   
   KEGG ORTHOLOGY (1)   
   RefGene (90)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (104)   

Download RDF

DBGET integrated database retrieval system