KEGG   Xylanibacter ruminicola: PRU_2305
Entry
PRU_2305          CDS       T01212                                 
Symbol
secDF
Name
(GenBank) protein-export membrane protein SecDF
  KO
K12257  SecD/SecF fusion protein
Organism
pru  Xylanibacter ruminicola
Pathway
pru02024  Quorum sensing
pru03060  Protein export
pru03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    PRU_2305 (secDF)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PRU_2305 (secDF)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PRU_2305 (secDF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pru02044]
    PRU_2305 (secDF)
Secretion system [BR:pru02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   PRU_2305 (secDF)
SSDB
Motif
Pfam: SecD_SecF SecD_1st Sec_GG MMPL SpoVAE
Other DBs
NCBI-ProteinID: ADE82986
UniProt: D5EVQ7
Position
2776011..2779043
AA seq 1010 aa
MQNKGIVKFIAVLLILVCCFYLSFSFVTRHYESKAAAMGEEAGAEYLDSINNEKVYMGIY
SLKQCREMEIGLGLDLKGGMNVILEVSVPDVVDVLADHKTDAAYKKAMELAKKEEETSQN
DFISLFVKYWKQEGNGRPLAAIFATQQMKGKVSTSSTDSQVEAALRTEVQSAVDNSFNVV
RNRIDKFGVVQPNIQKLEGQSGRIMVEMPGIKEPERVRKLLQGSANLEFWETYNSQEVTP
LLAQLNQRWAAQGGVDVADTTAVDSAATAAVADSAKTATGDLAAKLAKKDSKDNKAVEMA
KKQNPLFSIFQPTQGNTLAVVGYANARDTAEINKMIYSDLAGRIFPAELKLRWGATPEDF
GGQNTKGDIFELYALKVTEPSGRAPLEGDVITGAKDDFDQMGHPSVSMQMNSDGARRWSQ
ITKQNIGKAVAIVLDDAVYSAPRILTQIDGGNSQITGNFTIEATKDLANTLNSGKMPAPT
RIVQEEVVGPSLGAQSIQQGIISFVVAFVLLMIYMIMLYGFVPGLLSDIALLFNLFFTLG
ILTSFQAALTMPGIAGIVLTLGTAVDANVLIYERIKEELKKGLGVKEALNKGYSNAFSAI
FDSNFTSLITGIILLYFGTGPVKGFATTWIIGIVISFFTAVYLTRVVYDAMLSKDKWTNL
TFVTGYSKNLMQNAKYNFMGAYKKTYALWAAVAVVCIGSFFVRGLSQSIDFTGGRNYVVT
LDKQTPVEEVRKAMAGAFINTIGEKANQEANTSVIALGTDGKTVRISTNWDIESNNPEVD
DKAENILFAALKKAGLVSQENVEAFKNPDVREGGSIISSAKVGPSVAKDITHGAIISVCI
ALIAIFLYILLRFRNLAFSVGAVVALALDALLVIGVYSLCWGWVPMSLEIDQVFIGAILT
VIGYSINDKVVVFDRIRENLGLYGKRDRQQLFNDSLNQTLARTINTSVTTLIVLLAIFIL
GGDSIRSFSLAMILGVVFGTLSSLFIAAPTAFLWMGRTIKEDDVEVAENK
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgcaaaacaaaggaattgtaaaatttatcgcagtgcttctgattctcgtgtgctgcttc
tacctttccttctcgttcgtaacacgccactacgaaagtaaggctgctgctatgggcgaa
gaggcaggtgcggagtacctcgattcaatcaacaacgagaaggtgtacatgggtatctat
tctctgaagcagtgccgtgagatggagattggcctgggtcttgacctgaaaggcggtatg
aacgttattcttgaggtatcagtacctgatgtggttgacgtattggccgaccacaagact
gacgctgcctacaagaaggccatggagctggctaagaaggaagaggagaccagtcagaac
gacttcatctctctgttcgtgaagtattggaaacaggagggcaacggtcgtccacttgct
gctatctttgctacccagcagatgaagggcaaggttagcacatcatctaccgactcacag
gtagaggctgcgctgcgtaccgaggtacagagtgccgttgataactcattcaatgtagtt
cgtaaccgtatcgataagttcggcgttgttcagccaaacatccagaagctcgaaggccag
agcggtcgtatcatggtagaaatgcctggtatcaaggagccagagcgtgtacgtaagttg
ctccagggttcagctaaccttgagttctgggagacctacaactcacaggaggttactcct
ctgctggctcagcttaaccagcgttgggctgctcagggtggtgttgacgtagccgacaca
actgctgttgacagcgccgctactgctgctgttgccgatagcgctaagactgctacaggc
gacctggctgctaaactggctaagaaggacagcaaggacaacaaggctgttgagatggct
aagaaacagaatcctctgttctctatcttccagcctacacagggtaacaccctcgctgta
gttggttatgctaacgctcgcgatactgccgagattaacaagatgatctactctgacctc
gctggtcgtatcttccctgctgagctgaagctccgttggggtgctacacctgaggacttc
ggaggccagaatactaagggcgacatcttcgagctctatgctctgaaggttactgagcct
tcaggtcgtgctccactggagggtgatgttatcaccggtgccaaggacgacttcgaccag
atgggtcacccctctgtatcaatgcagatgaactctgacggtgctcgtcgttggagccag
attaccaagcagaacatcggtaaggctgtagctatcgtgctcgacgatgccgtttactct
gctccacgtatccttactcagattgacggtggtaactctcagattactggtaacttcacc
atcgaggctactaaggacttggctaacacactgaactcaggtaagatgcctgctcctacc
cgtatcgtacaggaggaggttgtaggtccttcactgggtgctcagtcaatccagcagggt
attatctcattcgtagtagctttcgtactgctgatgatctacatgatcatgctttacggc
tttgtaccaggtctcctctcggatatcgctctgctgttcaacctgttcttcacactgggt
atccttacctcgttccaggccgctcttacaatgcctggtatcgccggtatcgtactgact
ctgggtaccgctgtagatgctaacgtgcttatctacgagcgtatcaaggaggagctgaag
aagggtcttggtgtaaaggaggctctgaacaagggttactctaacgctttcagcgctatc
ttcgactctaacttcacttcattgattaccggtatcatcctgctctacttcggtacaggt
cctgttaagggcttcgctaccacatggatcattggtatcgttatctcattcttcacagcc
gtttacctcactcgtgtagtttacgatgctatgctgtcaaaggataagtggactaacctc
accttcgtaacaggttactctaagaacctgatgcagaacgctaagtacaacttcatgggc
gcttacaagaagacctatgctctctgggctgctgtagcagtagtttgcattggttcgttc
tttgttcgtggtttgagccagagcatcgacttcactggtggtcgtaactacgttgtaaca
ctcgacaagcagactccagttgaggaggttcgtaaggctatggcaggtgcattcatcaac
actatcggcgagaaggctaaccaggaggctaacacctctgttatcgctctgggtactgac
ggtaagactgttcgtatctctacaaactgggatatcgagtcaaacaatcctgaggttgac
gacaaggctgagaacatcctgttcgctgccctgaagaaggctggtctcgtaagtcaggag
aacgttgaggcattcaagaatcctgatgttcgcgagggtggttcaatcatcagctctgct
aaggtaggtccttcagttgctaaggatatcacacatggtgctatcatcagcgtatgtatc
gctctgattgctatcttcctctacatcctgctgcgtttccgcaacctcgccttctctgta
ggtgctgttgtggctctggctctcgacgctctgctcgtaattggtgtttactcactgtgc
tggggttgggttccaatgtcgctcgagatcgaccaggtattcatcggtgctatcctgacc
gttatcggttactctatcaacgataaggtggtagtattcgaccgtatccgtgagaacctc
ggtctgtatggcaagcgcgaccgtcagcagttgttcaacgactcactgaaccagacactg
gctcgtaccatcaacacctctgtaaccacactgatcgtgctgttggctatcttcatcctt
ggtggtgatagcatccgctcgttctctctggctatgatcctgggtgttgtattcggtact
ctgagttcgctcttcatcgccgctcctacagccttcctttggatgggccgtactatcaag
gaggacgacgttgaggttgctgagaacaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (120)   
   KEGG ORTHOLOGY (1)   
   RefGene (117)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (132)   

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