KEGG   Psychrobacter sp. PRwf-1: PsycPRwf_0576
Entry
PsycPRwf_0576     CDS       T00541                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
prw  Psychrobacter sp. PRwf-1
Pathway
prw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:prw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PsycPRwf_0576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prw03021]
    PsycPRwf_0576
   03400 DNA repair and recombination proteins [BR:prw03400]
    PsycPRwf_0576
Enzymes [BR:prw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PsycPRwf_0576
Transcription machinery [BR:prw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PsycPRwf_0576
DNA repair and recombination proteins [BR:prw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PsycPRwf_0576
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ABQ93531
UniProt: A5WCZ0
Position
complement(693851..694111)
AA seq 86 aa
MARVTVEDCLHAVDNRFELVLVASKRAHQLAKGVSEPLVEVNNDKPTVLALREIAAGLVT
KDILNQPDHHFATNSLDLALSGGQGF
NT seq 261 nt   +upstreamnt  +downstreamnt
atggcacgtgtaaccgtagaagactgcttacatgcagtagacaaccgctttgagctggta
ttggttgccagcaagcgcgctcatcaactggccaaaggcgtctctgagccgttagttgaa
gtcaacaatgacaagccaactgtattggcgctgcgtgaaattgctgccggcctagtgacc
aaagatatcctaaaccaaccggatcatcattttgcgacgaactcattagatttggcatta
agtggcggtcaaggcttctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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