KEGG   Psychrobacter sp. PRwf-1: PsycPRwf_1211
Entry
PsycPRwf_1211     CDS       T00541                                 
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
prw  Psychrobacter sp. PRwf-1
Pathway
prw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:prw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PsycPRwf_1211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prw03400]
    PsycPRwf_1211
Enzymes [BR:prw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PsycPRwf_1211
DNA repair and recombination proteins [BR:prw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PsycPRwf_1211
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 SH3_13 AAA_11 SLFN-g3_helicase AAA_22 UvrD-helicase Herpes_Helicase Helicase_RecD PhoH nSTAND3 UvrD_C AAA_16 ResIII NACHT AAA_28
Other DBs
NCBI-ProteinID: ABQ94160
UniProt: A5WER9
Position
complement(1481693..1484056)
AA seq 787 aa
MKSNNNTATMRVEESWADTISDYILQRRAQTYAAYVQPSDTNTSTNFVETDSYLFKSLFM
VLAKQLEEGHTVLTLRQNSTELALQGRVAGKAAKLYAWQRDILQSLAGPLFDLIDSDAAL
AAIAQSQEDTQGELAHSEDSDPIFNLLNILMTRGNELWLQLSLPNSSKAQLVERFKLVQQ
LYELMQNDNKADVLSEKGLINSLSKFMQHVDQHPLFTQMSSALLAKENSLSKNIPISKQT
PIIYQSNHPHNNHLNKHLETDKKITFWLHRTWQAEFNLAKTIQNILNQPIKPLDIHIPDN
LNAQQVQAVKVANENAFSIITGGPGTGKTYTVAQLVIALQQAQANSDAQQALGEGSTIRF
STDSAGLALSAPTGKAAQRMQESLQAALDNAQVEVQLQEAKTIHRLLGIGRDGRPRYHAG
NPLGEDIIIVDEASMLGVELANYLVSAIKPGARLILLGDANQLAAVDAGAVLADLCRIDV
LQPIHAQLTESRRFHADSGIGKLATQINTTPTDMQQVWQLLTHDEALQFQSVNIQLGSDA
TDREADDVETAVFNHQLINSLSNKKIISKLSQNYLPYLNKIHQLIKHPIAKSVPEAVSLT
VSELMSKFNRFRILTAGHNGEWGDHNINDYLTRWHMTQLKLPLGKSPWFHGRPVMVLQNN
YELGLFNGDIGICLQTQQKGEGGRLEVFFENKIQGIAVNLLNDELIATAYAMTIHKSQGS
EFDHVAVTFDNSNSRLLSKELIYTAVTRAKKKVSIFSTKRALQKAVQTPTQRYTGLALQF
EQKAAVD
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgaaatccaataacaatacggcaactatgcgcgttgaagagagctgggctgataccatt
agtgactatattttacagcgccgagctcagacgtatgcggcatatgtacagccaagtgac
accaacacgtcaacaaattttgtagagactgacagttatttatttaaatcgctgtttatg
gtgttggctaagcagttggaggaggggcatactgtattaactctgcgccaaaatagtact
gagctggcattacagggcagggtagcaggcaaggcagctaagctttatgcgtggcagcgc
gatattctacaaagtttggcagggcctttgtttgatctgattgacagtgatgcggctttg
gctgctatcgcacagtcgcaagaggatactcaaggcgagcttgcgcactctgaggacagt
gatcctatctttaacctacttaatattttgatgacccgtggtaatgagctgtggttacag
ttaagcctacctaatagcagtaaagctcagctggttgagcgttttaagttggttcagcag
ctatacgagttaatgcaaaatgataataaggcagatgtgttaagtgaaaaagggttgata
aatagcctaagcaaatttatgcaacatgtagatcagcaccctttatttacccagatgtca
tcggcactgctagccaaagaaaatagcctaagcaaaaatatcccaatttcaaaacaaaca
cccatcatttaccaaagcaatcacccgcacaacaatcatttaaacaagcacttagagaca
gacaaaaaaataactttctggctgcatcgtacttggcaagctgagtttaacctcgctaaa
accatacaaaatatcttaaaccaaccaataaaacccttagatatccatattcctgacaat
ctcaatgctcagcaggtacaagcagttaaagtcgctaatgagaacgcttttagcatcatc
acgggcggtcccggtacgggaaaaacctataccgtggcacagcttgtgattgccttacag
caggctcaggcaaatagcgatgcacagcaagcattaggggagggctctacgattagattt
agtacagacagcgcagggcttgctctatcggcaccaacgggtaaagcggcacagcgtatg
caagaatcactgcaagcggctttagacaacgctcaagtagaggtgcagctgcaagaagca
aagaccattcaccgtctgctggggatcggtagagatggcagaccacgctatcatgcaggt
aatcctttgggggaggacatcattattgtcgatgaagcctcaatgctcggcgtagagttg
gccaattacttagtgagcgccattaagccaggggcaaggctaatcttattaggggatgcc
aatcagctggccgcagtggatgccggggcagtactcgccgacttatgccgtattgatgta
ttgcagcccattcatgcacagctgacagagagccgccgcttccatgccgactcgggtatt
ggtaaattggccacgcagattaatacaacaccaacggacatgcagcaggtgtggcagcta
ttaacccatgacgaggcgttacagttccaaagcgttaacattcaactgggcagtgatgct
actgatagggaggctgacgatgtagagacggctgtttttaatcatcaattaataaatagc
ctaagcaataaaaaaatcatttcaaagctgtcccaaaactaccttccatatttaaataaa
atccatcaactaataaaacatcccatagcaaaatccgtgccagaagcagtaagccttact
gtttctgagcttatgagtaagtttaaccgatttcgtatcttaactgccggacacaatggg
gagtggggagatcataatatcaatgactatctgacccgctggcatatgacgcagcttaag
ctgcctttgggcaaaagtccttggtttcatggtagaccggttatggtgttacagaataat
tatgagctgggtctatttaacggagatattggtatttgtttgcagacacagcaaaaaggt
gagggtggccgtttagaggtattttttgagaataagatccaaggtattgcggtcaatttg
cttaatgatgagctgattgctaccgcgtatgccatgactattcacaagtcgcaaggctct
gaatttgatcatgttgcagttacctttgataatagcaacagccgactgcttagcaaagag
ctgatttatactgcagtgacccgcgctaagaaaaaggtaagtatttttagtaccaaacgt
gcgttacaaaaagcggtgcagacgccgacgcagcgctatacaggtcttgctttacaattt
gagcaaaaggcggctgttgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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