KEGG   Paenibacillus rhizovicinus: GZH47_03795
Entry
GZH47_03795       CDS       T06983                                 
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
prz  Paenibacillus rhizovicinus
Pathway
prz02020  Two-component system
prz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:prz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GZH47_03795
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    GZH47_03795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prz03021]
    GZH47_03795
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:prz02035]
    GZH47_03795
Transcription machinery [BR:prz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GZH47_03795
Bacterial motility proteins [BR:prz02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    GZH47_03795
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 UPF0122 Sigma70_r3 HTH_38 HTH_16
Other DBs
NCBI-ProteinID: QHW30043
UniProt: A0A6C0NWE4
Position
complement(848300..849085)
AA seq 261 aa
MIEPKAPHLSNIEIWRKWKEDGDIEAKKRLIEQYLTLVDYVSNRMAIGLPKNVSKDDLAS
NGVMGLIDAIEKFDYRRGLQFETYASWRIRGAIIDGLRQGDWVPRSVREKAKRIEEAYQI
LEQQYMRSVSDTEISGYLAVTEKEFGVMLQEIAVTTVCSLEDPIRDEESETRLSLLIDEK
AKNPDYKVHEFYLKESLVRGIDRLTEKERTVISLFYYEELSLSEIAEVMSLSPSRISQLH
SKAILRLRGALEKQKDQLMQH
NT seq 786 nt   +upstreamnt  +downstreamnt
atgattgagccgaaggcgcctcatttatctaacatcgagatttggcggaaatggaaagaa
gacggggacattgaagcaaagaaacgtctgatcgagcaatatttgactttggtggattat
gtaagcaaccggatggcgatcggccttccgaaaaatgtatccaaggatgacttggcgagc
aacggcgtgatgggattaatcgatgccattgaaaaattcgattacagaagaggtcttcag
tttgaaacgtatgcttcctggcgaattcgcggcgctattattgacggcctgcggcaggga
gattgggttccgcgttccgtgcgggagaaagcgaagcgaattgaagaagcttatcaaata
ctggaacaacaatatatgcgctccgtaagcgatacggaaatcagcgggtatttggctgtg
acggagaaggaattcggcgtcatgctgcaggaaatcgccgtgacgacagtatgttcgctg
gaagatcccatccgggacgaagaatcggaaacgcggttgtcgcttcttattgacgagaag
gccaaaaacccggactataaagtccatgaattttatttgaaagaatcgctcgttcgtggc
atcgatcgtctgaccgagaaagagagaaccgtcatttcgctattctattatgaggagctg
tcgctaagtgaaatcgctgaggtgatgtcgttatcgccatcgcgtatttctcagctgcat
tccaaagcgattctgaggcttcggggggcattggaaaaacaaaaagatcaattgatgcaa
cattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system