KEGG   Paenibacillus rhizovicinus: GZH47_05670
Entry
GZH47_05670       CDS       T06983                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
prz  Paenibacillus rhizovicinus
Pathway
prz00300  Lysine biosynthesis
prz00550  Peptidoglycan biosynthesis
prz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:prz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GZH47_05670
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    GZH47_05670
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:prz01011]
    GZH47_05670
Enzymes [BR:prz01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     GZH47_05670
Peptidoglycan biosynthesis and degradation proteins [BR:prz01011]
 Precursor biosynthesis
  Amino acid ligase
   GZH47_05670
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase MoCF_biosynth DUF1611 Ribosomal_S5_C
Other DBs
NCBI-ProteinID: QHW30381
UniProt: A0A6C0NW84
Position
complement(1217330..1218826)
AA seq 498 aa
MRVEQLASLLLTAVLVGEGETEITGIEVDSRKAGAGDLFICISGFKTDGHHYAAGAVANG
AAAIVAERQLPDIPPTVPQIIVKDSRHALAVIADYFYGQPSRRLRLIGVTGTNGKTTTTY
LIERILRDAGYSPGVIGTVEMRYGGQALPMSGTTPDALELQRSLQAMTEAGADYCVMEVS
SHALEQGRVKGCRYRTAIFTNLTQDHLDYHATMERYAAVKELLFSRLGNEFAAAPKDRLF
AVLNADDPVSQGYAGATVAEVITYGVDRDADVRASNVRITAHGTAFRVDTFAGSADITLK
MAGKYNVYNALGAISAALIEGIAIQQIKGSLEALPGVPGRVEAVNAGQPFAVIVDYAHTP
DGLENVLKAVKEFAVGRVICVFGCGGDRDRTKRPLMGSISARYADYSLITSDNPRTEDPL
RILADVEAGLLQDGVAKDRYELLADRRAAIQKAVEMASRDDVVLIAGKGHETYQDICGVK
SDFDDREVAKEAIRSLSL
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgcgggtggaacagttggcttcactgctgcttacggctgtccttgtcggagaaggggaa
acggaaattaccgggatcgaggtcgattcccggaaagccggagcgggagatctattcata
tgcataagcggctttaaaaccgacgggcatcattatgccgccggggccgttgcaaacggg
gcggcagccatcgtcgccgaacggcagctgccggatattccgcctacggtaccgcaaatc
atcgtcaaggacagccgtcacgcgctggccgtcattgcggattatttttacggacagcca
agccgccgattgaggctgatcggggtgacgggcacgaacggcaagacgacgacgacctat
ttaatcgaacggattttacgggatgccggctattcgccgggcgttatcggaactgtggaa
atgcggtacggcggccaagcgctgccgatgtcgggcacgacgccggatgcgctggagctg
cagcgttccttgcaagcgatgacggaagcgggcgcggattactgcgtcatggaagtgtcg
tcgcatgcattggagcaaggccgggtgaaaggctgccggtaccggacggccatcttcacg
aacctgacgcaggatcatctggactatcatgcaaccatggagcgttacgccgccgtcaaa
gaattgctcttcagccggctaggcaacgaattcgctgctgctcccaaggatcggctgttc
gcggtgttgaatgccgacgatcccgtatcccagggctatgctggcgccacggtggcggaa
gtgattacgtacggcgtggatcgcgatgccgacgttcgcgcctcgaatgtgcggataacg
gcgcatggaacggcattccgcgtggatacgttcgcggggtctgccgacattacgctgaag
atggcgggcaaatacaatgtctacaatgcgctcggcgcgatcagcgcagcgctcatcgaa
ggcatagcgattcaacagatcaaaggaagtctcgaagcgctgcccggcgtgcccggacgt
gtggaagcggtaaacgcaggtcagccgttcgcggtcatcgtcgattacgcgcatacgccg
gacgggttggagaacgtgctgaaagccgtcaaggaattcgccgttggccgggtcatctgc
gtcttcggctgcggcggcgaccgcgaccggacgaagcgtccgctgatgggcagcatatcg
gcgcgttatgccgattacagcctcattacctccgacaatccgcgcacggaggatccgctc
cggatactagccgacgtggaggcgggcctgctgcaggacggcgtcgcgaaggaccgttac
gagctgctcgcagatcgccgcgccgcgattcaaaaagcggttgaaatggcgagccgtgac
gatgtagtattaattgcggggaagggccatgaaacctaccaggatatatgcggcgtcaaa
agcgattttgacgaccgggaagtggccaaagaagcgataaggagtctttcattgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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