KEGG   Proteiniphilum saccharofermentans: PSM36_1543
Entry
PSM36_1543        CDS       T04672                                 
Name
(GenBank) DEDDh 3'-5' exonuclease domain family
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psac  Proteiniphilum saccharofermentans
Pathway
psac03030  DNA replication
psac03430  Mismatch repair
psac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSM36_1543
   03430 Mismatch repair
    PSM36_1543
   03440 Homologous recombination
    PSM36_1543
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psac03032]
    PSM36_1543
   03400 DNA repair and recombination proteins [BR:psac03400]
    PSM36_1543
Enzymes [BR:psac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSM36_1543
DNA replication proteins [BR:psac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PSM36_1543
DNA repair and recombination proteins [BR:psac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PSM36_1543
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 DUF2095
Other DBs
NCBI-ProteinID: SCD20363
UniProt: A0A1R3SVL6
Position
I:1944179..1944949
AA seq 256 aa
MKLNLRNPLVFFDLETTGINITRDRIVEISFLKVHPNGKEEVRSRRINPEIPIPPQATAI
HGITDDDVKDCPTFKQVARSLADQLEGCDLAGFNSSRFDVPMLAEEFLRAGVDFDMSKRK
FVDVQIIFHKKEQRTLEAAYAFYCNKKLENAHSAEADTIATYEVLKSQLDRYPDLENDIE
VLSKEYSSFNNNVDFAGRFVYDEKGVEVFNFGKHKGRPVSEVLKNEPSYYAWMMDGDFPL
NTKQVLTKIRLREMNS
NT seq 771 nt   +upstreamnt  +downstreamnt
atgaagttaaatcttaggaatccgttggtcttcttcgatttggagacgaccgggatcaac
atcactcgcgaccgtattgtagagatatcatttttaaaagtccatcctaacggaaaggag
gaagtaagatcgcggcgtatcaatcccgagatacctattcctccccaggctacagcgatt
cacggtatcactgatgatgacgtgaaagattgccctacctttaaacaggtggcgcggtca
ctggccgaccaactggaagggtgtgacctggccggcttcaactcgagccggtttgatgtg
ccgatgctggcggaagagttcctccgagccggtgtggattttgatatgagtaaacgtaaa
tttgtggatgtgcagatcatcttccataaaaaggaacagcgtacactcgaagcggcatat
gccttttattgcaataaaaaactggagaatgcacattctgccgaagcggataccatcgct
acttatgaagtgttgaaatctcaactcgaccgttatcctgatctggagaatgatatcgag
gtgctatcaaaagagtattcgagtttcaataataatgtggattttgccggacggtttgtc
tatgatgagaaaggggtagaagttttcaattttgggaaacataaagggaggccggtgtca
gaagtccttaaaaatgaaccgagttattatgcctggatgatggatggtgatttcccgctc
aataccaaacaggtgcttactaaaatcaggcttcgtgagatgaatagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system