KEGG   Pontimonas salivibrio: C3B54_11339
Entry
C3B54_11339       CDS       T05334                                 
Name
(GenBank) tRNA pseudouridine38-40 synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
psai  Pontimonas salivibrio
Brite
KEGG Orthology (KO) [BR:psai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psai03016]
    C3B54_11339
Enzymes [BR:psai01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     C3B54_11339
Transfer RNA biogenesis [BR:psai03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C3B54_11339
 Prokaryotic type
    C3B54_11339
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AVG23337
UniProt: A0A2L2BNW7
Position
307419..308264
AA seq 281 aa
MSIRLRIDLSYDGSDFSGWAIQPHRRTVQGDIELALSRVFHSELQQVRTVVAGRTDAGVH
ATGQVCHADLPDEAQAVLNRAGGDEHILRRLRGALGKTSPIWIQSVGRAPAGFDARFSAL
SRRYEYRMADADSTKDPRRVDHTLWVEDLLDIGEMNTLGDTLRGVADWASFCRARPGATT
IRELQQFSWKRDADNVLVATVIADAFCHSMVRSLVGAAVAVGRADLSVEQIVALRDATTR
TSSWKTMAAKGLTLCEVKYPPDDELFTRAEATRSKREQPTD
NT seq 846 nt   +upstreamnt  +downstreamnt
gtgagcatcaggttacgcatcgacctttcctacgatgggtctgacttttccggttgggca
atccaaccccaccggcgtaccgttcagggcgacatcgagcttgccctttctcgggtgttt
cactctgagcttcagcaggtgcgcaccgtggtcgcgggtcgcacggatgccggcgttcat
gccaccgggcaggtgtgccacgccgacttgccggatgaagcacaggctgttctgaaccgc
gctggtggcgacgagcacatcctccgtcgactgcgaggggcgctgggtaaaacctcgccc
atctggattcagtcggtgggtcgtgcaccggcgggcttcgatgcgcgtttttcggcactc
tcgcgccgctacgaatatcgaatggccgatgccgattccacaaaagacccccgccgggtc
gaccacacgctgtgggttgaggatcttttggatatcggggaaatgaataccctcggcgac
acacttcgtggcgttgccgactgggcgagtttttgtcgggcccgacctggggcaaccacc
attcgggaacttcagcagttctcctggaagcgtgatgccgacaacgtcttagtggccacc
gttatcgctgatgctttttgccactccatggttcggtcgctggtgggagccgcggtcgcg
gtgggccgtgccgatttgagcgttgaacagatcgttgcgctgcgggatgccacgacgagg
accagtagctggaagacaatggctgcgaagggtctgacgctgtgtgaggtgaaataccct
ccggacgacgagcttttcactagggctgaggccaccaggtcaaagcgcgaacaacccaca
gattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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