KEGG   Piscirickettsia salmonis: PSLF89_1308
Entry
PSLF89_1308       CDS       T03982                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
psal  Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:psal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psal03021]
    PSLF89_1308
Transcription machinery [BR:psal03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSLF89_1308
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AKP73265
Position
798445..799476
AA seq 343 aa
MINQVDQSKAALELNDSLLLEESINDGGMTEPSVEKVKDDKLANKAKVKPAAQRGKRREA
NQESTGSPDATQLYLGEIGFSPLLSAEEEVYYSRRAQRGDQDARRRMIESNLRLVVKIAR
RYINRGLSLLDLVEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRL
PIHVVKELNLYLRAARQLSQLLDHEPSAEEIAELLDKPVEDIKKILVLNERISSVDSMWG
DEAEKSLLDSIAEENSASEPASWMESEDIKEHLDQWLNDLTDKQRSVVMRRFGLRGHEAA
TLEQVGREIGLTRERVRQIQVEALKRLREMLEGHNLSSEMLMV
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgattaatcaagtcgatcaaagcaaagccgctttagaattaaatgattcgttattgcta
gaggagtccattaatgatgggggtatgactgagcctagcgttgagaaagttaaagatgat
aaattagcaaataaggccaaagttaagcccgctgcgcagcgggggaagcgtcgagaagcc
aatcaagaatcaacaggaagtccagatgcaacacagctgtacctaggtgagattggcttt
tcacccttattgtctgctgaagaggaagtgtattactccaggcgcgcacagcgtggagat
caagatgccagacggcggatgatagaaagtaatctgcgcttagttgttaaaattgctcgt
cgctatattaatcgaggcttatctttattagaccttgttgaagaaggcaatttaggctta
attcgtgcggttgaaaaatttgatccagagcgcggttttcgtttctcaacctatgcaact
tggtggattcgccagaccatagagcgggcgattatgaatcagacgcggaccatccgcttg
cctattcatgtggtaaaagagttaaatttatatttacgtgccgcacgccagttatcacag
ctgcttgatcatgaacctagtgctgaagagattgctgagctattagataagcctgtagaa
gatattaaaaaaatactggttttgaatgagcggatttcctcggttgatagcatgtgggga
gatgaggctgagaaatcgttacttgatagtatcgcagaagaaaacagcgcatcagagcca
gcctcttggatggaaagtgaagatattaaagaacacttggatcaatggttgaatgacttg
actgataaacagcgttcggtggtgatgcgccgctttgggctgcgtggtcatgaagcggcg
actttggagcaagtggggcgtgagattggcttaacccgtgagcgtgttcgtcagattcaa
gtggaagcgttaaagcgtttacgtgaaatgcttgaaggacataacctatctagcgaaatg
ttgatggtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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