KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_4843
Entry
Psyr_4843         CDS       T00246                                 
Name
(GenBank) NUDIX hydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
psb  Pseudomonas syringae pv. syringae B728a
Pathway
psb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Psyr_4843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psb03019]
    Psyr_4843
Messenger RNA biogenesis [BR:psb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Psyr_4843
SSDB
Motif
Pfam: NUDIX NUDIX_4 NUDIX_2
Other DBs
NCBI-ProteinID: AAY39870
UniProt: Q4ZLV2
Position
complement(5750022..5750501)
AA seq 159 aa
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPQETPEDALYRELNEEVGL
ERHDVQILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLSRD
NT seq 480 nt   +upstreamnt  +downstreamnt
gtgatcgaccccgatggtttccgtcctaatgtcgggattattctgacaaacgatgctggt
caggtcctatgggctcggcgtattaaccaggatgcctggcagtttcctcaagggggtatc
aacccgcaggagacgccggaagacgcgctttatcgcgaattgaatgaagaagtcggtctg
gaacgacatgatgtgcaaatacttgcctgcactcggggctggttgcgctatcgtctgccg
caaagactggtccgtacccacagccagccgctgtgtatcggccagaagcaaaaatggttt
ctcctgcgcctgatctccaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgctgggtcagttattggtatccgttaggccaggtggtgacattcaag
cgcgaggtgtatcgacgcgcactcaaagagcttgccccgcgcctcttatcgcgcgactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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