KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_5027
Entry
Psyr_5027         CDS       T00246                                 
Name
(GenBank) bacterial nucleoid protein HU alpha subunit
  KO
K05787  DNA-binding protein HU-alpha
Organism
psb  Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:psb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psb03032]
    Psyr_5027
   03036 Chromosome and associated proteins [BR:psb03036]
    Psyr_5027
   03400 DNA repair and recombination proteins [BR:psb03400]
    Psyr_5027
DNA replication proteins [BR:psb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Psyr_5027
Chromosome and associated proteins [BR:psb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Psyr_5027
DNA repair and recombination proteins [BR:psb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Psyr_5027
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_2 HU-CCDC81_bac_1 HU-CCDC81_euk_2 DUF4226
Other DBs
NCBI-ProteinID: AAY40054
UniProt: Q4ZLB8
Position
complement(5967367..5967642)
AA seq 91 aa
MRKPDVAAAIAEKADLTKEQSNRVLNAILEEITGALNRKDSVTLVGFGTFLQRHRGARTG
KNPQTGEPVKIKASNTVAFKPGKALKDSVNP
NT seq 276 nt   +upstreamnt  +downstreamnt
atgcgcaaaccagatgttgcagccgccatcgctgaaaaggcggatctcaccaaagaacaa
tccaatcgcgttctcaatgccatccttgaagagattactggcgcactgaaccgcaaggac
agtgtcacgctggtaggtttcggtacttttctgcaacgccaccgcggcgctcgcactggc
aagaacccacagaccggggagccggttaaaatcaaggcaagcaacacggttgccttcaaa
ccggggaaagccctgaaagacagcgtcaatccttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system