KEGG   Mollisia scopiformis: LY89DRAFT_643546
Entry
LY89DRAFT_643546  CDS       T04865                                 
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
psco  Mollisia scopiformis
Pathway
psco03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    LY89DRAFT_643546
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psco03400]
    LY89DRAFT_643546
DNA repair and recombination proteins [BR:psco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     LY89DRAFT_643546
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_23 AAA_29
Other DBs
NCBI-GeneID: 28821525
NCBI-ProteinID: XP_018073329
JGI: 643546
UniProt: A0A194XFR9
Position
Unknown
AA seq 1226 aa
MVKQENATPARPPPASLKKASSSSQQRSIQSFFSKAPSSTPNSSNTSSNGVLKANDTSEK
VNAMAKPKASVKKPAFRKSAVKSMTPVPSSDTRELSSSQENKNGGVPEEVEESGLPSPST
PSKRVQVFNGMALTPSRKAKKAVSYVESDDEDDEEDVFEPARNSRKRGGSKPKVVESDSE
DDFVGGLDGAVDDDDEMDDFVVDDDSDAPSKPSKKRKRPTSTATSRKRPEIAPPTPFEKD
DDEEDEDEDLDIPGPSTAQQWKYDPENTAPLQPRSANISKTPASNKKPIKEKACKTEPEK
RYPWLASLQDMDRNPIGHPDYDPRTLYIPPNAWAKFSPFEKQYWEIKQKFWDTVVFFKKG
KFYELYEIDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGYKIARVDQCESA
LGKEMRETEEKTSKGKKDKIIRRELACVLTRGTLVEGSMLQDDMATYCVAIKESTVDELP
AFGIAFVDTATGQFFLSDFVDDLDLTKFETFIAQTRPQELLLEKGCVSTKALRILKNNTS
PTTIWNHFKPGKEFWPAEIARRELDCSGYFVSQEAGGAEVWPEKLEEARDKDLVMSATGA
LVQYLRTLKLERDLLTQGNFTWYSPIQKGTTLVLDGQTLINLEIFANTFDGSSDGTLFTL
LNRCVTPFGKRLFRQWVCHPLADAERINERLDAVDMLNKDRSLSDQFTASMTRMPDLERL
ISRIHAGSCRPEDFVKVIDGFGQIEYTMDLLSAFQGGDGIVDRLIASMPDLKEPLEFWKT
AFDHEKAREEKLLVPASGVEEEFDDSQDKIKQLEDDLKDLLKRKRKDLGGSAKIQFKNIG
KEVYQIEVPTAIKAPNGWQVMSTAAGFKRYYFPELKGLIRQLQEAQETHGQIMKQVAGRL
YARFDQDYMTWLQAVKVISQLDCLISLAAASAALGEPSCRPTFVESERSVVEFEELRHPC
MLPNVTDFIPNDVKLGGDVPNIDLLTGANAAGKSTILRMTCVAVIMAQIGCYVPCVSATM
TPCDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATSRSLVILDELGRGTSSYDGVAV
AQSVLHHVASHIGCIGFFATHYHSIATEFAGHPEVAPKRMQIHVDDENRQVTFLYKLEDG
VAEGSFGMHCAAMCGIPNKVIDRAEVAAREWEHTSRLKESLEKARSGCYIPLGVQSDVSW
ILKEALAEDGIEERGLNVLMKAIANL
NT seq 3681 nt   +upstreamnt  +downstreamnt
atggtcaagcaagagaacgccacaccggcacgaccgccgcctgcttccttgaagaaagcc
tcaagctcgtcacagcaacggtcaatccagagcttcttctcgaaggcaccatccagtact
ccaaactcgtcgaacacatcgtcgaacggcgtcttgaaagccaatgatacttcggaaaag
gtcaacgcgatggccaaacctaaagcatctgtgaagaaacctgcgttcaggaaatctgca
gtgaagagcatgacgcccgttccaagcagtgacacgagggaactgtcaagctctcaagag
aataaaaacggaggagtcccggaagaggtagaagaatctgggttaccttcgccctcgaca
ccttctaagagagtccaggttttcaacggcatggcattaacaccgtcacgaaaggccaag
aaagctgttagctacgtggagtctgacgacgaagatgacgaagaggatgttttcgaacct
gccagaaactcaagaaagcgagggggatcaaagccaaaggtcgtggaatcagactctgag
gatgattttgttggtggtctagatggagcagtagatgatgatgatgagatggacgatttc
gtggtcgacgacgattctgatgctccatcgaagccatcaaagaagaggaagcgcccaaca
tccaccgcgacgtccagaaagcgtcccgaaatcgcgcctcccacacctttcgagaaggat
gatgacgaggaagatgaggacgaggacttggacatcccaggtccgtccacagctcaacag
tggaagtacgatcccgaaaatactgcaccacttcaaccgagatctgccaatatttcaaag
actccggcatcaaataagaagccgattaaggagaaagcttgcaagaccgaacctgagaag
cgctatccatggttggctagtttacaagacatggatcgcaatcctattggacatccagac
tatgatccaaggactctctatatccctcccaacgcttgggctaagttctcccccttcgag
aagcagtattgggagatcaagcaaaagttctgggatactgtcgtcttcttcaagaagggc
aaattctatgagctttacgaaatcgatgccacgattggccatcaattatttgacctcaag
cttactgacagagttaatatgcgcatggttggagtaccagagatgtctttggatcattgg
gccaaccaattcgtagcaaagggctacaagatcgctagagttgaccaatgcgagtctgca
cttggtaaagaaatgcgcgagactgaagagaagactagcaaaggcaagaaagacaaaatc
atccgtcgagagctggcatgcgttcttacgagaggcacgttggttgaaggcagcatgctt
caggatgatatggccacctactgcgttgctatcaaggagtctaccgtggatgagctgcca
gcttttggtattgctttcgtcgatactgcgactggacaattcttcctctctgatttcgtt
gatgacttggacttgacgaagttcgagactttcattgcccagacccgaccccaagaactt
ctcttggagaagggatgcgtatccacaaaggctctacggatcttgaagaataataccagt
ccaactacgatctggaatcacttcaaacctggtaaagaattttggccagctgaaattgct
cgtcgagagcttgactgcagcggatacttcgtttcacaggaagctggaggagcggaagtg
tggccagagaagctggaagaagccagagacaaggacctcgttatgtctgccacgggtgca
ttggttcaatacctcagaacactcaagctggaacgagatctgctgacccagggtaacttc
acttggtacagcccgatccagaagggtaccacgctcgtcctggatggtcagacgttgatt
aatttggaaatcttcgccaacacatttgacggaagctccgacggaacactatttactctt
ctcaaccgctgtgtaacaccgtttggtaaacgactgttccgacagtgggtttgccatccg
ttggcagacgctgaacgaatcaacgagcgtttggatgctgtggatatgctcaacaaagat
cgtagcctcagcgatcagtttactgcttcgatgactcggatgccagatcttgagcgactc
atttcccgtatacacgcaggatcctgcagaccggaagactttgtcaaagtcatcgatggt
tttgggcaaatagagtacactatggatctgctctctgccttccagggaggagatggaatt
gttgatcgcctcattgcttctatgccagatctcaaggagccattggaattctggaagacg
gcatttgaccatgaaaaggcaagggaggagaagcttctcgtaccagcaagcggtgttgag
gaggagtttgacgacagccaggacaaaattaagcagctcgaagatgacttgaaggatctc
ctcaaacgtaagcgaaaagacttgggcggctcagcaaagatccaatttaagaacattgga
aaggaggtgtatcagattgaggtgccgacagcaatcaaagcacccaatggctggcaggtc
atgtcaacggctgcaggcttcaaacggtattacttcccagaactgaaaggtctcatccgg
caactccaggaggcacaagagactcatggtcaaattatgaagcaagtagctggtcgactc
tacgctcgctttgaccaagattacatgacttggttgcaagccgtcaaggtaatctcacag
cttgattgcctcatcagtcttgctgctgcgtctgcagctcttggagagccaagctgccgt
ccaacctttgttgaatctgaaagaagtgttgtcgagttcgaggagcttcgccacccttgc
atgctaccaaatgttactgacttcattccgaatgatgtcaagcttggtggtgatgtcccg
aatattgatttgttgactggcgcaaacgcagctggaaagtcaacaattctcagaatgact
tgcgtagctgtcattatggcacagattggctgctatgtgccttgtgtatctgcgaccatg
actccatgtgatcgaatcatgtctcgtctaggagctaatgataacatcttcgctgcacag
agtaccttctttgttgaactttccgagaccaagaagattctctccgaggctacatcacgc
tcacttgtcattctcgatgagctgggccgtggaacaagctcatatgatggagtggctgtt
gctcaatctgtccttcatcacgtcgcttcgcatattggctgtattggtttcttcgccact
cattatcactctattgcaacagagtttgcgggccatccagaagtcgcaccgaagcgaatg
caaattcacgtcgatgacgagaatcgtcaagttacattcttgtacaagctcgaggacggt
gtggcagaaggcagtttcggtatgcattgcgcagccatgtgtggcattcccaataaggtc
atcgaccgtgctgaagtggctgctcgcgaatgggaacacacgagcaggctgaaggagagt
ttggaaaaagcgagaagcggatgttatatcccgcttggtgtacaaagtgacgtgagctgg
attctcaaggaagctctggctgaggatggaattgaagagaggggactaaatgtgctcatg
aaagctattgcgaatttgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (45)   

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