KEGG   Mollisia scopiformis: LY89DRAFT_676386
Entry
LY89DRAFT_676386  CDS       T04865                                 
Name
(RefSeq) histone deacetylase
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
psco  Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:psco00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psco01009]
    LY89DRAFT_676386
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_676386
   04131 Membrane trafficking [BR:psco04131]
    LY89DRAFT_676386
   03036 Chromosome and associated proteins [BR:psco03036]
    LY89DRAFT_676386
Enzymes [BR:psco01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     LY89DRAFT_676386
Protein phosphatases and associated proteins [BR:psco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     LY89DRAFT_676386
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     LY89DRAFT_676386
Membrane trafficking [BR:psco04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    LY89DRAFT_676386
Chromosome and associated proteins [BR:psco03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     LY89DRAFT_676386
SSDB
Motif
Pfam: Hist_deacetyl Arb2 FAM195
Other DBs
NCBI-GeneID: 28823308
NCBI-ProteinID: XP_018063366
JGI: 676386
UniProt: A0A132B9G6
Position
Unknown
AA seq 792 aa
MSQDYMDTVIQSNELPVSNGHSNGFLDPRVLNKLDDLDIPDSTDSREDSFESESKLDIAI
PRRAYLPTGCCYDIRMKLHANADFSASPHHPEDPRRIESIMEEFRVAGLIYTDGSTEQLM
EILKESPEKYMYRIPARRATETEICTVHDAAHYDWVQSLSSMTSTQLRQLTADFDMGRKS
LYVGNLTYEAALVSAGGAIETCKAVVTGVVKNAVAVIRPPGHHAEHDESLGFCIFNNVPI
AAKVCMKEFPDLCRKVLILDWDVHHGNGIQNMFYDDPNVLYISLHVYSNGTFYPGQPENE
DLPDGGLDKCGIGRGIGRNVNIGWADQGVGDGEYMTAFQKIVMPIAHEFDPDLVIISAGF
DAAAGDELGGCFVSPACYSHMTHMLMGLANGKVAVCLEGGYNLRAISRSALAVAKTLMGE
PPERIVPPPLNRVSADTINMVKRIQANYWECMRPGVIPSAEIQVRSTERMSDVIRRAQKS
QLYDEHNMIPLKIMRKGLTEQYENQVLVTPDLYKAKKVIMFIHDSPDVLAQPDLHDNKIY
PHNAYVTDELKLYIDWAIQNGFGVVDVNFPKPIYKTNNFGKELDSYIPKPSENLLANQTK
ELLTYIWENWLELLGSVSITLVGVGDANIGIKQLLTANDDVYKKIPSVLSFIDSNLRSVR
SETDPGLSAWYRQHSLLYIMPDHACFSDPIQSRKVAKKSYGTVRAANVEVGESGNPIGRM
LRAHAEASKEWILSRVMDWEAENLQVDPDETEDEDESDITNPGLGIHGGAVDGDIDMAGM
GGIVSSRMPVLS
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgtcacaggattatatggacactgtcatacagagtaacgaactcccggtcagcaatggc
cattcaaatggcttccttgaccctcgagttctcaataaattagacgacctcgatatccct
gattccacggactctcgagaagattccttcgaatccgagtcgaagctcgacattgcaata
ccacgcagagcctaccttccaactggctgctgctacgatatccgaatgaagctacatgca
aatgccgacttctctgcaagcccacaccaccccgaagaccctcgacgaatagagtcgatc
atggaggaatttcgagtcgctggtttgatatacaccgatggaagcacagaacagctcatg
gagatacttaaagaatcgccggagaaatatatgtaccgaattcctgcacggagagctacc
gaaacagagatttgcactgttcacgatgcagcacattacgactgggttcaatcgttgagc
agcatgacttcaactcaattgcgccaattgacagctgactttgatatgggtcggaaatct
ctctacgttggcaatcttacatacgaagcagccttggtatcagctggaggagctatcgaa
acctgcaaagccgtcgtcactggagttgtcaagaacgctgtcgcagtcattcgacctcca
gggcatcacgcagagcacgatgagtctctcggcttctgcatcttcaataacgttccgatt
gcggcgaaagtatgcatgaaggagtttcctgatctctgccggaaggtcttgatcctcgat
tgggatgttcatcatggaaatggcatccagaatatgttctacgatgatccaaacgtcctc
tacatttctctccacgtatacagcaatggtacattctatcctggtcagcctgaaaatgag
gatttacccgatggaggccttgataaatgtggcataggaagaggcattggtcgcaatgtc
aatatcggctgggcagatcagggcgttggtgatggtgaatatatgactgctttccaaaag
atcgtgatgccaatcgcacacgagtttgacccagatctggtcataatctccgccggtttc
gatgctgccgctggagatgagcttggaggatgcttcgtttcgcctgcctgctactcacac
atgacacatatgctcatgggcttagcaaatggaaaggttgctgtctgtctcgagggcggt
tataacctgagagctatttcgaggtcagcattagcagtcgccaagacattgatgggagaa
ccacctgagcgaatcgtccctccaccactcaatcgggtctcagcagatactatcaacatg
gtaaagcggatacaggccaactactgggaatgcatgcgaccaggtgtcataccttcagca
gaaatccaagttcgatctacagagagaatgagcgacgttattcggcgagcccagaagagt
caattatacgatgagcataatatgatacccctgaagatcatgcgtaagggcttgacggag
caatacgaaaatcaagtcctagttacaccggatctgtacaaggcaaagaaggttatcatg
ttcatccatgattcacccgatgttctggcacaaccagatctccacgacaacaagatctat
cctcacaatgcctatgtgaccgacgagctcaaattatatatcgattgggccatacaaaac
ggcttcggtgtcgtcgacgtcaattttcccaaacctatctacaaaaccaacaactttggc
aaggaactcgactcctacataccaaaaccttccgaaaaccttttggcgaaccagaccaag
gaactacttacctacatctgggaaaattggttggagctcttgggcagcgtcagcattact
cttgtcggtgtgggtgacgcaaatatcggcatcaaacaattgctcactgcaaatgatgac
gtctacaagaaaattccctcagtcctgtccttcatcgacagcaacctccgcagcgtaaga
tccgaaacagaccccggcctctcagcttggtaccgccaacactccctcctttacataatg
cccgaccacgcctgcttcagcgacccgatacaatcccgtaaagtagccaagaagagttat
ggtaccgtgagagctgccaacgtcgaggttggcgaaagcggtaacccgatcggcagaatg
ctcagagcacatgcagaggcgagcaaggagtggatcttatcaagggtgatggattgggaa
gcagagaatctgcaggtcgatcccgatgagacggaggatgaggacgaaagcgatatcacg
aatccggggctgggcattcatggaggggccgtggatggggatattgatatggcggggatg
gggggaatagttagttcgaggatgccggtcttgagctga

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Ontology (6)   
   KEGG BRITE (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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