KEGG   Mollisia scopiformis: LY89DRAFT_715041
Entry
LY89DRAFT_715041  CDS       T04865                                 
Name
(RefSeq) Prp19-domain-containing protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
psco  Mollisia scopiformis
Pathway
psco03040  Spliceosome
psco04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LY89DRAFT_715041
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    LY89DRAFT_715041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psco03041]
    LY89DRAFT_715041
   04121 Ubiquitin system [BR:psco04121]
    LY89DRAFT_715041
   03400 DNA repair and recombination proteins [BR:psco03400]
    LY89DRAFT_715041
Enzymes [BR:psco01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     LY89DRAFT_715041
Spliceosome [BR:psco03041]
 Complex B
  Other components
   Prp19 complex
    LY89DRAFT_715041
 Complex C
   Prp19-CDC5 complex
    LY89DRAFT_715041
Ubiquitin system [BR:psco04121]
 Ubiquitin ligases (E3)
  U-box type E3
   LY89DRAFT_715041
DNA repair and recombination proteins [BR:psco03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    LY89DRAFT_715041
SSDB
Motif
Pfam: Prp19 WD40 ANAPC4_WD40 eIF2A V_ATPase_I_N U-box Ge1_WD40 VWA_2 zf-Nse
Other DBs
NCBI-GeneID: 28827902
NCBI-ProteinID: XP_018076393
JGI: 715041
UniProt: A0A194XPC2
Position
Unknown
AA seq 473 aa
MLCAISGEAPQFPVASSKSGTVYEKRLIEAYITENHKDPVNGEELEITDLIDLKSAKIVT
PRPPALTSIPSLLSTFQNEWDSLALESFTLRQQLQQTRQELATALYQHDAAVRVIARLTR
ERDEARDALSKVTIGSGGANNGDAMQIDSQGLPEELAAKVDATQEKLSKSRRKRPVPKEW
ADSEVIEKFGVAIQSEPLYPGCTSLAVDESGQLAIVGGSDGVVGVYAIQENKVQQSFKAG
STVTGAVWYGAQPVVSTSSGAIKVFGDDEITFNSHAGSANAIALHPSGDILASVGVDKSF
VFYDLPGGKAVTQVNTDSELTTAAFHPDGHLFAAGGADGQIKLFHVKTGENAANFELGGP
VQDLAFSENGIWFAAVAKGSNSVVVFDLRKEGKAAEAKILEIGGQVDSIRWDYTGQYLAA
SGPRGLTISQYTKSSKSWSDVISTAVPATAVEWGPEAKTLITVNNDGVVTVLG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgctgtgcgcaatatctggtgaagctccgcaattccctgtggcttcttcgaagtccggc
accgtctacgaaaagcgcttgatcgaggcttatatcacggagaaccacaaggatccagtg
aatggggaggaactcgagattacagacctcatcgacctcaagtctgccaaaatagttact
ccgcgaccaccagctctgacgtccatcccatctctgctgtcgactttccagaacgaatgg
gactctcttgcgctcgagtcgttcacattaaggcaacagctccagcagacgagacaagaa
ctggccacggcactttatcagcatgatgcagcggttagagttattgcgcgactgactaga
gagcgcgatgaggcccgagatgcgctgtcgaaagtcacaatcggaagtggaggcgccaac
aatggggatgctatgcagattgacagccaaggacttcctgaggagcttgctgccaaagtg
gacgctacacaagagaaactttccaagagccgtcgaaagcgaccagtacctaaggagtgg
gccgattcagaagtcattgagaagtttggtgttgctattcagtcagaacctctataccca
ggctgtacatcactcgctgtagatgaatctggtcagctggctatcgtaggtggatccgat
ggggttgtcggcgtctatgctattcaggaaaacaaggttcagcagtctttcaaggcaggc
agcactgttacgggagctgtctggtatggagcacagcctgtggtttctacttcctctgga
gccattaaggtcttcggagatgacgagattaccttcaattcacatgcaggcagcgcaaat
gcgattgctctccatcctagtggcgatattcttgcatctgtgggtgtagacaagagcttc
gttttctacgatctaccaggaggcaaggctgtcactcaagtcaacactgactcagaatta
actacagcggcattccaccctgatggacatctctttgcagctggaggtgctgatggacag
atcaaactgtttcacgtgaaaactggagagaatgcggcaaactttgaattgggagggcct
gtacaggaccttgcattctcggaaaacggtatttggtttgcagctgtggcgaaaggctcc
aatagcgttgttgtgttcgatctccgaaaagaggggaaggctgccgaggcgaagatcttg
gaaattggtggacaagtcgacagcattcgatgggattacacaggacagtatcttgctgcc
tcgggaccaaggggtcttactatctcgcagtataccaagtcgtcgaagtcatggtcagat
gtcatcagcacagctgtaccagcaactgcggtggagtggggtccggaggcgaagactctg
atcactgtcaataacgatggggtggtaactgtgcttggatga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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