KEGG   Pseudogulbenkiania sp. NH8B: NH8B_0742
Entry
NH8B_0742         CDS       T01619                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
pse  Pseudogulbenkiania sp. NH8B
Pathway
pse03030  DNA replication
pse03430  Mismatch repair
pse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NH8B_0742 (holB)
   03430 Mismatch repair
    NH8B_0742 (holB)
   03440 Homologous recombination
    NH8B_0742 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pse03032]
    NH8B_0742 (holB)
   03400 DNA repair and recombination proteins [BR:pse03400]
    NH8B_0742 (holB)
Enzymes [BR:pse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NH8B_0742 (holB)
DNA replication proteins [BR:pse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NH8B_0742 (holB)
DNA repair and recombination proteins [BR:pse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NH8B_0742 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C AAA
Other DBs
NCBI-ProteinID: BAK75574
UniProt: G2IY17
Position
755422..756429
AA seq 335 aa
MLYPWQAADWQRLNRERERLPNAWLFNGPSGIGKLAFAEHLAASLLCESPRPDHAACGQC
EACRWFAHGSHPDFRRLTPLGDDEDEAKEGSKPTRKLPVIKIEAVREVIDFAHLTAHRAG
QRIVLVEPAEALNPAAANALLKILEEPPAEVLFLLVAHAPQRLLPTIKSRCRAFPLTAPT
QGEALAWLDAAGVDNARTELAHHGGTPLFEHDAALAKLRQQFLDGLARPTLADAIALAEQ
IDRHKLPLALPLEWLQKWLHDLAGLRLAGQLRYYPDHQAALQALAERADLALLMGCYQSL
IQLAPFGQHTLNVRLQLEALLMDYLNVFAARTAAR
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgctctatccctggcaagccgccgactggcagcgtctcaaccgcgaacgcgagcgcctg
cccaacgcctggctgttcaacggtcccagcggcatcggcaagctggccttcgccgagcac
ttggcagcctcgctgctgtgcgaatcgccgcgccccgaccacgctgcctgcggccagtgc
gaggcctgccgctggttcgcccacggcagccacccggacttccgccgtctcacgccgctg
ggcgacgacgaggacgaggcgaaggagggcagcaagccgacacgcaagctgccggtgatc
aagatcgaggcggtgcgcgaggtgatcgacttcgcccaccttaccgcgcaccgtgccgga
cagcgcatcgtgctggtggagccggccgaggcgctcaacccggcggcggccaacgcgctc
ctgaagatcctcgaggagccgcccgccgaggtgctgttcctgttggtggcgcacgccccg
cagcggctgctgccgaccatcaagagccgctgccgcgcttttccgctgacggcgccgacg
caaggggaggcactggcctggctggacgccgccggggtggacaacgcccgcaccgagctg
gcgcaccacggcggcacgccgctgttcgagcacgacgcggcgctggccaagctgcgccag
cagttcctcgacggcctggcgcggccgacgctggccgacgccatcgcgctcgccgagcag
atcgaccgccacaagctgccgctggcgctgccgctggagtggctgcagaagtggctgcat
gatctggccggtttgaggctggcgggccaactccgctattatcccgatcatcaggcggca
ctgcaggccctggccgagcgtgccgatctcgccttgctgatgggctgctaccagagcctt
attcagctggccccgttcggtcagcacacgctgaacgtacgcttgcagctcgaagcgctg
ttgatggactatctgaacgtgttcgcggcccgcacggccgcgcgctga

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