KEGG   Pseudogulbenkiania sp. NH8B: NH8B_1002
Entry
NH8B_1002         CDS       T01619                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
pse  Pseudogulbenkiania sp. NH8B
Pathway
pse00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pse00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    NH8B_1002 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pse01007]
    NH8B_1002 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pse03016]
    NH8B_1002 (lysS)
Enzymes [BR:pse01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     NH8B_1002 (lysS)
Amino acid related enzymes [BR:pse01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   NH8B_1002 (lysS)
Transfer RNA biogenesis [BR:pse03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    NH8B_1002 (lysS)
 Prokaryotic type
   Other AARSs
    NH8B_1002 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: BAK75834
UniProt: G2IZN6
Position
complement(1005887..1007389)
AA seq 500 aa
MSEHEQTAPALDENQIMAERRQKLKAIREQGVAFPNDFRRSHMARQLHDAHDDKEREQLE
GEQIEVAVVGRMMLKRVMGKASFATLQDGSGRIQIFVSNDKTGIELHDQFKHWDMGDIVA
ARGTLFKTKTGELTVQAGEVRLLSKNIRPLPEKFHGLTDQEQKYRQRYLDLIMNEQSRDV
FTKRSQIVQGIRSYMVDEGYLEVETPMMHPIPGGATAKPFVTHHNALDMPLYLRIAPELY
LKRLVVGGLERVFEINRNFRNEGMSTRHNPEFTMMEFYEAYSDYQRMMEMTEGVIQKLAK
ELLGTLHIQYQGKTVDLSKFERLTIAGAIKKYNPQYTDEQLHDRAWLKEEIARLGGKPVL
TDGIGGLQLSLFEECAESQLWNPTFIVDYPVEVSPLARGSDKHPGITERFELFVVGRELA
NGYSELNDPEDQAARFLAQVQQKDAGDDEAMHYDADYIRALEFGLPPTGGCGIGIDRLVM
LLTDAPSIRDVILFPQMRAE
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgtcagaacacgaacaaactgcccccgccctcgatgagaaccagatcatggcggaacgc
cgccagaagctgaaggccatccgcgaacagggcgtcgccttccccaacgacttccgccgt
agccacatggcgcgccaactacacgatgcgcacgacgataaggagcgcgaacagctggaa
ggcgaacagatcgaggtggcggtggtcggccgcatgatgctcaagcgcgtcatgggcaag
gccagcttcgccacgctgcaggacggcagcggccgcatccagatcttcgtctcgaacgac
aagaccggcatcgagctgcatgaccagttcaagcactgggacatgggcgacatcgtcgcc
gcccgcggcacgctgttcaaaaccaagaccggcgaactgacggtgcaggccggcgaagtg
cgcctgctgtcgaagaacatccgtccgctgccggagaaattccacggcctgaccgatcag
gagcagaagtaccgccagcgttacctcgacctgatcatgaacgagcagtcgcgtgacgtg
ttcaccaaacgctcgcagatcgtccagggcatccgctcctacatggtggacgagggttac
ctggaagtcgaaacgccgatgatgcacccgatcccgggcggcgccacggccaagccgttc
gtcacgcaccacaacgcgctggacatgcccttgtacctgcgcatcgccccggagctgtac
ctgaagcggctggtggtgggcggcctggagcgcgtgttcgagatcaaccgcaacttccgt
aacgaagggatgagcacgcgccacaaccccgaattcaccatgatggagttctacgaggcc
tactcggactaccagcgcatgatggagatgaccgagggcgtgatccagaagctggccaag
gaactgctcggcacgctgcacatccagtaccagggcaagacggtcgacctgtcgaagttc
gagcgcctgaccatcgccggcgccatcaagaagtacaacccgcagtacactgacgaacag
cttcacgaccgtgcctggctgaaggaagagatcgcccgtctcggtggcaagccggtactc
accgacggcatcggcggcctgcagctgtcgctgttcgaagagtgcgccgagagccagctg
tggaacccgaccttcatcgtcgactacccggtggaagtgtcgccgctggcgcgcggttcg
gacaagcaccccggcatcaccgagcgcttcgagttgttcgtggtcggccgcgagctcgcc
aacggctactcggagttgaatgatccggaagaccaggccgcccgtttcctggcccaggtt
cagcagaaggatgccggtgacgacgaggcgatgcactacgacgccgactacatccgcgcg
ctggaattcggcctgccgccgaccggcggctgcggcatcggcatcgaccgcctggtgatg
ctgctgaccgatgccccgtcgatccgcgacgtcatcctgttcccgcagatgagagcagaa
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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