KEGG   Pseudonocardia sp. AL041005-10: WY02_12520
Entry
WY02_12520        CDS       T04051                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
psea  Pseudonocardia sp. AL041005-10
Pathway
psea03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    WY02_12520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psea03021]
    WY02_12520
   03400 DNA repair and recombination proteins [BR:psea03400]
    WY02_12520
Enzymes [BR:psea01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     WY02_12520
Transcription machinery [BR:psea03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     WY02_12520
DNA repair and recombination proteins [BR:psea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      WY02_12520
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 HTH_23
Other DBs
NCBI-ProteinID: ALE79123
UniProt: A0A0M4Q700
Position
complement(2762736..2766245)
AA seq 1169 aa
MAVSRAAATTSTLSASANPNYPGAPTRVTFAKIAQPLEVPDLLDLQIQSYEWLVGSEAWF
QRRIEAGDDLPVSGLEEILTEISPIEDFSGSMSLSFSDPRFDEVKASVEECRDKDMTYGA
PLFVTAEFTNNTTGEIKSQTVFMGEFPVMTDKGTFIINGTERVVVSQLVRSPGVYFDHAI
DKTTEKDVYSVKIIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTAEQIGER
FGFSETIMTTLEKDNTAGQDEALLDIYRKLRPGEPPTRESAQALLENLFFKDKRYDMAKV
GRYKANKKLGLDIDNSVGTLTEEDVATTIEYLVRLHAGETTMAVGSGDSAREIPVETDDI
DHFGNRRLRTVGELIQNQVRVGLSRTERVVRERMTTQDVEAITPQTLINTRPITAAIREF
FGTSQLSQFMDQHNPLAGLTHKRRLSALGPGGLSRERAGMEVRDVHPSHYGRMCPIETPE
GPNIGLIGSLASFARVNPFGFIETPYRKVVEGVVTSQIDYLTADEEDRFVVAQANARLNE
DGSFAEDRILVRRKGGEVDLISPSGVEYIDVSPRQMVSVATAMIPFLEHDDANRALMGAN
MQRQSVPLLRSESPLVGTGMELRAAVDAGDVVTAESAGVVEELCADYITVMDDEGQRQTY
RLNKFRRSNQGTCNNQKPIVDEGQRVEVGQVLADGPCTENGEMALGKNLLVAIMPWEGHN
YEDAIILSQRLVQDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEDVLADLDERGII
RIGAEVQPGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGENGKVIGI
RVFSRDDDDELAPGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPQEDMPFLPDG
TPVDIILNTHGVPRRMNIGQILETHLGWIAKSGWEIEGTPEWAAQMPEELYSVPADTNTA
TPVFDGAREHEITGLLGSTRPNRDGERMVGPDGKAQLLDGRSGEPYPFPVAVGYMYILKL
AHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKS
DDVVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDADDE
DLERAAANLGINLSSRPGSESMTVDDVVN
NT seq 3510 nt   +upstreamnt  +downstreamnt
ttggctgtctcccgcgccgccgcgaccacctcgaccctctccgcttcggcgaacccgaac
taccccggcgcacccacccgggtcaccttcgcgaagatcgcccagccgttggaggtcccc
gaccttctcgacctgcagatccagtcgtacgagtggctggtcggcagcgaggcctggttc
cagcgccggatcgaggccggtgacgatctcccggtgagcggtctggaggagatcctcacc
gagatctcgccgatcgaggacttctcgggctcgatgtcgctgtccttctccgaccctcgc
ttcgacgaggtcaaggcctccgtcgaggagtgccgggacaaggacatgacctacggtgcc
ccgctgttcgtgacggcggagttcacgaacaacaccaccggtgagatcaagtcccagacg
gtcttcatgggcgagttccccgtgatgaccgacaagggcaccttcatcatcaacggcacc
gagcgcgtcgtcgtgtcgcagctcgtccgttcgccgggtgtctacttcgaccacgcgatc
gacaagacgaccgagaaggacgtctactcggtcaagatcatcccgagccggggtgcgtgg
ctggagttcgacgtcgacaagcgcgacaccgtcggtgtccgcatcgaccgcaagcgccgt
cagccggtcaccgtgctgctgaaggccctggggtggaccgccgagcagatcggcgagcgt
ttcgggttctccgagacgatcatgacgacgctcgagaaggacaacaccgcgggccaggac
gaggcgctgctcgacatctaccgcaagctgcgccccggcgagccgccgacgcgcgagtcg
gcccaggcgctcctggagaacctgttcttcaaggacaagcgctacgacatggccaaggtc
ggtcgctacaaggccaacaagaagctcggcctcgacatcgacaactcggtcggcacgctg
accgaggaggatgtcgccaccaccatcgagtacctcgtccggctgcacgccggcgagacc
acgatggccgtgggctccggtgactccgcgcgggagatcccggtcgagaccgacgacatc
gaccatttcggcaaccggcgcctgcgcaccgtcggcgagctgatccagaaccaggtccgg
gtcggtctgtcccgcaccgagcgggtcgtccgcgagcggatgaccacccaggacgtcgag
gccatcacgccgcagaccctgatcaacacccggccgatcacggccgcgatccgggagttc
ttcggcacctcgcagctgtcgcagttcatggaccagcacaacccgctggccggactgacc
cacaagcgccgcctgtcggcgctcggcccgggcggtctgtcccgagagcgtgccggcatg
gaggtccgcgacgtccacccgtcgcactacggccgcatgtgcccgatcgagaccccggag
ggtccgaacatcggtctgatcggctcgctggcgtccttcgcgcgggtcaacccgttcggc
ttcatcgagacgccctaccgcaaggtcgtcgagggtgtcgtcacctcccagatcgactac
ctgaccgccgacgaggaggaccgcttcgtcgtcgcccaggcgaacgcccgcctcaacgag
gacggctcgttcgccgaggaccggatcctggtccgccgcaagggcggcgaggtcgacctg
atctcgccctcgggcgtcgagtacatcgacgtctcgccgcgccagatggtgtcggtcgcg
acggcgatgatcccgttcctcgagcacgacgacgcgaaccgcgcgctgatgggcgcgaac
atgcagcgccagtcggtgccgctgctgcgctcggagtcgccgctggtcggcaccggtatg
gagctgcgtgccgccgtcgacgccggtgacgtcgtcaccgccgagtccgccggtgtcgtc
gaggagctgtgcgccgactacatcaccgtcatggacgacgagggacagcgtcagacctac
cgtctgaacaagttccgccggtcgaaccagggcacctgcaacaaccagaagcccatcgtc
gacgaggggcagcgggtcgaggtgggccaggtgctcgccgacggtccctgcaccgagaac
ggtgagatggcgctgggcaagaacctgctcgtggcgatcatgccgtgggagggccacaac
tacgaggacgcgatcatcctgtcgcagcgcctcgtgcaggacgacgtgctcacctcgatc
cacatcgaggagcacgagatcgacgcgcgcgacacgaagctgggcgccgaggagatcacc
cgggacatcccgaacgtctccgaggacgtgctggccgacctcgacgagcgcggcatcatc
cggatcggcgccgaggtccagcccggcgacatcctggtcggcaaggtcacgcccaagggc
gagaccgagctgaccccggaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgc
gaggtccgcgacacctcgctgaaggtcccgcacggcgagaacggcaaggtcatcggcatc
cgggtcttctcccgcgacgacgacgacgagctggccccgggcgtcaacgagctggtccgc
gtctacgtggcccagaagcgcaagatctccgacggcgacaagctcgccggccggcacggc
aacaagggcgtcatcggcaagatcctcccgcaggaggacatgccgttcctcccggacggc
acgccggtcgacatcatcctgaacacccacggtgtgccgcgtcgtatgaacatcggccag
atcctggagacccacctcgggtggatcgccaagtccggctgggagatcgagggcacgccc
gagtgggcggcgcagatgcccgaggagctctactcggtgcccgccgacacgaacaccgcg
acgccggtgttcgacggtgcgcgcgagcacgagatcacggggctgctgggctcgacccgt
cccaaccgggacggcgagcggatggtcggtccggacggcaaggcgcagctgctcgacggc
cgctccggtgagccgtacccgttcccggtcgcggtcggctacatgtacatcctgaagctg
gcccacctggtggacgacaagatccacgcccggtcgaccggcccctactcgatgatcacc
cagcagccgctgggcggtaaggcgcagttcggtggccagcgcttcggtgagatggagtgc
tgggcgatgcaggcgtacggcgccgcctacaccctgcaggagctgctgacgatcaagtcc
gacgacgtcgtgggccgcgtgaaggtctacgaggcgatcgtcaagggcgagaacatcccg
gagccggggatccccgagtcgttcaaggtgctcctcaaggagctgcagtcgctctgcctg
aacgtcgaggtgctctccagcgacggtgcggcgatcgagatgcgggacgccgacgacgag
gacctcgagcgtgccgcggcgaacctgggcatcaacctgtccagccgcccgggctcggaa
tcgatgaccgtcgacgacgtcgtcaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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