KEGG   Stutzerimonas frequens: DM292_00725
Entry
DM292_00725       CDS       T05921                                 
Name
(GenBank) exodeoxyribonuclease VII small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
psed  Stutzerimonas frequens
Pathway
psed03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    DM292_00725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psed03400]
    DM292_00725
Enzymes [BR:psed01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     DM292_00725
DNA repair and recombination proteins [BR:psed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     DM292_00725
SSDB
Motif
Pfam: Exonuc_VII_S Phage_TAC_11 Vps53_N
Other DBs
NCBI-ProteinID: AWT08848
Position
complement(158929..159171)
AA seq 80 aa
MARKKAALDFEQSLAELQQLVERLESGELSLEDSLTCFEQGIGLTRDCQAALSQAEQKVQ
ILLERDGSLQEAPFESDPEA
NT seq 243 nt   +upstreamnt  +downstreamnt
atggcccgcaagaaagctgcactcgatttcgaacaatcccttgccgagctgcaacagctg
gtggagcgcctggagagcggcgagctgtcgctggaagactcgctgacctgcttcgaacag
ggcatcggcctgacccgcgactgtcaggcggcgctgagccaggccgagcagaaggtgcag
atcctgctggaacgcgacggcagcctgcaggaagcccccttcgagtcggaccccgaagca
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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