KEGG   Stutzerimonas frequens: DM292_12630
Entry
DM292_12630       CDS       T05921                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
psed  Stutzerimonas frequens
Brite
KEGG Orthology (KO) [BR:psed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psed03016]
    DM292_12630 (rnd)
Enzymes [BR:psed01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     DM292_12630 (rnd)
Transfer RNA biogenesis [BR:psed03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    DM292_12630 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: AWT10966
Position
complement(2740482..2741606)
AA seq 374 aa
MAIETQWVVDDEHLARLCAEWRQLPYVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPL
AVRDWRAFAALLEDAAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNIGFSMGY
SRLVQAVLAIELPKGETRSDWLQRPLSDMQVRYAAEDAQHLAELYEALLPKLSEDKRAWV
LEDGAELVANLQRESDPDEAYRDVKQAWRLKPQQLAVLKVLTAWRERQARARNQPRNRVL
REASLWPLARTQPRDLVTLARIEEMHPRTVRQDGEALLAMIREAATMPEQDWPAALPEPL
PLEVSGLLKKLRAVGQREAKVLDIAPELMLRKKTLEALLKSGYPDGPYQLPDSLRGWRRE
RMGQALLDVLEKRT
NT seq 1125 nt   +upstreamnt  +downstreamnt
gtggccatcgaaactcaatgggtcgtggatgatgaacatctggcccgcctctgcgccgaa
tggcgccagctgccctatgtggcagtggataccgaattcatgagggtcgataccttctat
cccatcgccgggctggtgcaggtcggtgacgggcggcgtgcctatctgatcgacccgctg
gccgtgcgcgactggcgcgcgtttgccgcgctgctggaagatgctgctgtggtgaaggtc
ctgcatgcctgcagcgaggatctcgaagtactgctgcgcctgaccggcagcctgccgcag
ccgctgttcgacacccagctggcggccggctacctgaatatcggcttctccatgggctac
tcacgcctggttcaggccgtgcttgccatcgaactgcccaagggagaaacgcgctcggac
tggctgcagcggcccctgagcgacatgcaggtgcgctatgccgcggaggatgcgcagcat
ctggccgaactctatgaagcgctgctgccgaagctgtccgaggacaagcgtgcctgggta
ttggaggatggtgccgagctggtggccaacctgcagcgcgaatccgatcccgatgaggcc
taccgtgatgtgaagcaggcctggcggctcaagccgcagcagctcgccgtgctcaaagtg
ctgaccgcctggcgcgagcgtcaggcccgtgcgcgcaaccagccacgcaatcgcgtgctg
cgtgaggccagcctgtggccgctggcgcgtacccagccgcgcgatctggtaacactggcg
cgcatcgaggagatgcatccgcgtaccgtgcgccaggatggcgaagccctgctggcgatg
attcgcgaggccgcgacgatgcccgaacaggattggccggcagcactgccggagccgttg
ccgctggaagtttccggcctgttgaagaaactgcgggcggtcggccagcgcgaggcgaag
gtgctggatatcgcgccggaactgatgctgcgcaagaaaaccctcgaagctctgctgaaa
agcggctaccccgacggcccatatcaactgcccgattcgctgcgcggctggcgccgcgag
cggatggggcaggccctgctggatgtactggaaaagcgcacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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