KEGG   Stutzerimonas frequens: DM292_13865
Entry
DM292_13865       CDS       T05921                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
psed  Stutzerimonas frequens
Pathway
psed00470  D-Amino acid metabolism
psed00550  Peptidoglycan biosynthesis
psed01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:psed00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    DM292_13865
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    DM292_13865
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:psed01011]
    DM292_13865
Enzymes [BR:psed01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     DM292_13865
Peptidoglycan biosynthesis and degradation proteins [BR:psed01011]
 Precursor biosynthesis
  Amino acid ligase
   DM292_13865
SSDB
Motif
Pfam: MurD-like_N Mur_ligase_M Mur_ligase_C TrkA_N F420_oxidored
Other DBs
NCBI-ProteinID: AWT11202
Position
complement(2976990..2978333)
AA seq 447 aa
MLIASDQFRIVVGLGKSGMSLVRHLARRGLPFAVVDTRANPPELASLQAEYPDVQVRCGE
LDVDFLCTASELLVSPGLPVSTPALQAAAARGVKLSGDIELFAREAKAPIVAITGSNAKS
TVTTLVGEMAAAAGRKVAVGGNLGTPALDLLADDVELYVLELSSFQLETTEQLNAEVATC
LNISEDHMDRYAGLPAYHQAKHRIFRGARQVVVNRDDRLSRPLVGEDVPTWTFGLGKPDF
KGFGLFEERGEKYLAFQFEALMPVRELKIRGAHNQSNALAALALGHAVGLPFEPMLETLR
RFAGLPHRCQWVGKHQAVSYYDDSKATNVGAALAAIEGLGADIDGKLVLIAGGDGKGADF
SGLRTPVSRYCRAVVLLGRDASRLAEALGDAAPLVHVASLEEAVQRAAEHAEAGDAVLLS
PACASLDMFKNFEERGRLFAAAVEALD
NT seq 1344 nt   +upstreamnt  +downstreamnt
gtgctcatcgcttccgaccagttccgcatcgttgtcggcctcggcaaaagcggcatgtcc
ctggttcgccatctggcgcgccgcgggctgccgtttgccgtcgtcgatacccgtgcgaat
ccgccggagctggcctcgttgcaggcggagtacccggacgtgcaggtgcgctgcggcgag
ctggatgtggacttcctttgtaccgccagcgagctgctggtgagccccggcctgccggtc
agcactcccgcgctgcaggcggcggcggcccgcggggtcaagctgtctggagatatcgag
ctgttcgcccgtgaagccaaggcaccgatcgtcgcgatcaccggctccaatgccaagagc
actgtgaccacgctggtcggcgagatggccgctgcggccgggcgcaaggtggcggttggc
ggcaacctcggcacgccagcgctagatctgctggccgacgatgtcgagctgtacgtactg
gagttgtccagctttcagctggagaccaccgagcagctcaatgccgaagtggccacttgt
ctgaatatcagcgaagaccacatggaccgttacgccgggctgccggcttatcaccaggcc
aagcaccgcatcttccgtggtgcacgccaggtggtggtcaatcgcgacgaccgcctcagc
cggccgctggtgggcgaggatgttccgacctggacgttcggtctcggcaagccggacttc
aagggcttcgggctgttcgaggagcgcggcgagaagtacctggcgttccagttcgaagcg
ctgatgccggttcgcgagctgaagatccgtggcgcccataaccagtcgaatgcgctggcg
gccctcgctctcgggcatgccgtaggtctgccattcgagccgatgctcgagacgctgcga
cgtttcgccggtttgccgcaccgttgtcaatgggtcggcaagcatcaggccgtcagctat
tacgatgattccaaagccaccaacgtgggtgcggcactggctgcaatcgaaggactgggc
gcggatattgacggcaagctggtgctgatcgccggcggtgacggcaagggcgccgacttc
tccgggctgcgtacccctgtctcgcgttattgccgcgccgtggttctgctcggtcgcgac
gcatcgcgtctggccgaggcgctgggcgatgcagcacctctggtgcatgtagccagcctg
gaagaggcggtgcagcgcgccgccgaacatgcagaggcgggggatgctgtactgctctcg
cctgcctgcgccagcctcgacatgttcaagaacttcgaagagcgcggtcgcctgttcgcc
gctgcggtggaggcgctcgactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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