KEGG   Pseudactinotalea sp. HY158: GCE65_13745
Entry
GCE65_13745       CDS       T06271                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
psei  Pseudactinotalea sp. HY158
Pathway
psei03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psei00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GCE65_13745 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psei03021]
    GCE65_13745 (rpoB)
   03400 DNA repair and recombination proteins [BR:psei03400]
    GCE65_13745 (rpoB)
Enzymes [BR:psei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GCE65_13745 (rpoB)
Transcription machinery [BR:psei03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GCE65_13745 (rpoB)
DNA repair and recombination proteins [BR:psei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GCE65_13745 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DUF6292
Other DBs
NCBI-ProteinID: QGH70437
UniProt: A0A5Q2VY04
Position
complement(3122670..3126179)
AA seq 1169 aa
MAASRTPTAPHADAIANRTASRRVSFQKIIEPMQAPDLLGLQTESFDWLLGNEAWQARVA
AAGEDEVPSVSGLEEIFEEISPIEDFGQTMSLSFRDHRFEPPKYSSQESKDKDFTYSAPL
FVTAEFVNYTTGEIKSQTVFMGDFPLMSERGTFIINGTERVVVSQLVRSPGVYFERTPDK
TSDKDVFTAKIIPSRGAWLEFEIDKRDAVGVRVDRKRKQPVTVLLKALGLTESEIREEFA
EYPTVLETLEKDVVHTQDEALLDLYRKIRPGEPPTVEAGSALLENFYFNPKRYDLAKVGR
YKVNKKLGVDAPLDDSVLSNSDIVATIKYIAALHQDSSTMAGSRHGEPVEVVVETDDIDH
FGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVASIREFFG
TSQLSQFMDQNNPLAGLTHKRRLNALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLATYGRINPFGFVETPYRKVRSGLVTDDVEYLTADDEDRYVIAQANAVLTDDG
RFAEETVLVRTRGGEAIDVPAEDVDYMDVSARQMVSVATAMIPFLEHDDANRALMGANMQ
RQAVPLVRSESPLVGTGMERRAAVDAGDVIVAAKPGVVTEVSADAIVVTQDDGSQFNYRV
AKFRRSNQGTSYNQRVLVDEGQRVEVGSVLADGPATDEGELALGRNLLVAFMAWEGHNYE
DAIILSQRLVQDDVLSSIHIEEYEVDARDTKLGPEEITRDIPNVSDEVLADLDERGIIRI
GAEVGAGDVLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGTIIAVRE
FNREDGDELPPGVNQLVRVYVAQRRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTP
VDIILNPLGVPGRMNVGQVLETHLGWVAKQGWDAGIEQAKNGELPAWAENLAPEALKAAP
DSTVATPVFDGLREYELRGLLDCTLPGRDGERLIDSSGKAMLFDGRSGEPFPKPVSVGYM
YILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQEL
LTIKSDDVPGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSADGTEIEMR
DTDEEVYRAAEELGIDLSRRPDASSVEEI
NT seq 3510 nt   +upstreamnt  +downstreamnt
ttggctgcctcgcgcacccctactgctcctcacgctgacgcaattgcaaaccggacggca
tcccgccgtgtctcgttccagaagatcatcgagccgatgcaggcgcccgacctgctcggg
ctccagacggagagcttcgactggctcctcgggaacgaagcatggcaggcgcgggtcgcc
gccgccggagaagacgaggtcccctcggtctccgggctggaagagatctttgaggagatc
tctccgatcgaggacttcggtcagacgatgtccctgtccttccgcgaccaccgcttcgag
ccgccgaagtactcctcccaggagtccaaggacaaggacttcacctactcggccccgctg
ttcgtcacggccgagttcgtcaactacacgaccggcgagatcaagtcgcagaccgtgttc
atgggggacttcccgctcatgagcgagcgcggcacgttcatcatcaacggcaccgagcgg
gtcgtcgtctcccagctcgtgcggtccccgggcgtctacttcgagcggacccccgacaag
acctccgacaaggacgtcttcaccgccaagatcatcccgtcccggggtgcgtggctcgag
ttcgagatcgacaagcgggacgccgtcggcgtgcgcgtcgaccgcaagcgcaagcagccc
gtgaccgtcctgctcaaggccctcgggctgaccgagtcggagatccgggaggagttcgcc
gagtaccccacggtgctcgagaccctggagaaggacgtcgtccacacccaggacgaggcc
ctgctcgacctctaccgcaagatccgtcccggcgagccgccgacggtcgaggccggcagc
gcgctgctcgagaacttctacttcaaccccaagcgctacgacctcgcgaaggtcggtcgc
tacaaggtgaacaagaagctcggcgtcgacgccccgctcgacgactcggtgctgtcgaac
tccgacatcgtcgcgaccatcaagtacatcgcggcgctccaccaggactcctcgaccatg
gccggcagccggcacggcgagccggtcgaggtcgtcgtcgagaccgacgacatcgaccac
ttcggcaaccgccggatccgcgccgtgggtgagctcatccagaaccaggtgcgcaccggg
ctgtcgcggatggagcgcgtggtccgcgaacgcatgaccacccaggacgtcgaggcgatc
acgccgcagaccctcatcaacatccgcccggtcgtcgcctcgatccgcgagttcttcggc
acctcgcagctctcgcagttcatggatcagaacaacccgctcgcgggcctgacccacaag
cgccgcctcaacgcgctcggccccggtggtctgagccgtgaccgggccggcatggaggtg
cgtgacgtgcacccctcgcactacggccgcatgtgcccgatcgagaccccggagggcccg
aacatcggcctcatcggctcgctcgcgacctacggacgcatcaacccgttcggcttcgtc
gagaccccgtaccgcaaggtgcgctccggcctggtgaccgacgacgtcgagtacctgacc
gccgacgacgaggaccgctacgtcatcgcccaggcgaacgccgtgctgaccgacgacggc
cgcttcgccgaggagaccgtgctcgtgcggacccgcggcggggaggcgatcgacgtgccc
gccgaggacgtggactacatggacgtctccgcccggcagatggtctcggtcgccacggcc
atgatccccttcctcgagcacgacgacgcgaaccgtgccctcatgggcgccaacatgcag
cgccaggccgtcccgctggtgcgcagcgagtcgccgctcgtgggcaccggcatggagcgc
cgggccgccgtggacgccggtgacgtcatcgtcgccgcgaagccgggggtcgtgaccgag
gtatcggccgacgccatcgtggtcacccaggacgacggcagccagttcaactaccgcgtg
gcgaagttccgccgctcgaaccaggggacctcctacaaccagcgcgtgctggtcgacgag
ggccagcgggtcgaggtcggctccgtgctggccgacggtcccgccaccgacgagggcgaa
ctcgcgctcggacggaacctgctcgtggcgttcatggcctgggaagggcacaactacgag
gatgcgatcatcctctcccagcggctcgtgcaggacgacgtgctctcctcgatccacatc
gaggagtacgaggtcgacgcccgcgacacgaagctgggcccggaggagatcacgcgggac
atcccgaacgtctccgacgaggtgctggcggacctggacgagcgcggcatcatccgcatc
ggtgccgaggtcggggccggcgacgtgctcgtcggcaaggtcacgcccaagggcgagacc
gagctgacgccggaggagcgcctcctgcgcgccatcttcggcgagaaggcccgtgaggtg
cgcgacacctcgctcaaggtgccgcacggcgagtccgggaccatcatcgcggtccgggag
ttcaaccgggaggacggcgacgagctgcccccgggcgtcaaccagctcgtgcgcgtgtac
gtcgcgcagcgccggaagatcacggacggcgacaagctcgccggccgccacggcaacaag
ggtgtcatctcgaagatcctgcccatcgaggacatgccgttcctcgaggacggcaccccc
gtggacatcatcctcaacccgctcggcgtgccgggccgcatgaacgtcggccaggtgctc
gagacccacctcgggtgggtcgccaagcagggctgggacgccgggatcgagcaggccaag
aacggagagctgccggcctgggccgagaacctcgcgcccgaggccctcaaggccgcgccc
gacagcacggtcgccacgccggtcttcgacgggctgcgcgagtacgagctgcgcggcctg
ctcgactgcacgctgcccggccgcgacggcgagcggctcatcgactccagcgggaaggcg
atgctcttcgacggtcgctccggggagccgttcccgaagccggtctcggtgggctacatg
tacatcctcaagctgcaccacctcgtggacgacaagatccacgcccgttccacgggtccg
tactcgatgatcacccagcagcccctcggggggaaggcgcagttcggtggccagcggttc
ggcgagatggaggtgtgggcgctcgaggcctacggcgccgcgtacgcgctgcaggagctc
ctgacgatcaagtcggacgacgttcccggccgcgtcaaggtgtacgaggcgatcgtcaag
ggggagaacatccccgagcccggcatccccgagtccttcaaggtgctcatcaaggagatg
cagtcgctctgcctcaacgtcgaagtgctgtccgcggacggcaccgagatcgagatgcgc
gacaccgacgaggaggtctaccgagctgcggaggaactcggtatcgacctgtcccgtcgc
cccgacgcgagcagcgtcgaagagatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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