KEGG   Pseudodesulfovibrio cashew: GM415_11450
Entry
GM415_11450       CDS       T06353                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psel  Pseudodesulfovibrio cashew
Pathway
psel03410  Base excision repair
psel03430  Mismatch repair
psel03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GM415_11450 (recJ)
   03430 Mismatch repair
    GM415_11450 (recJ)
   03440 Homologous recombination
    GM415_11450 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psel03400]
    GM415_11450 (recJ)
DNA repair and recombination proteins [BR:psel03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     GM415_11450 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     GM415_11450 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      GM415_11450 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHHA1 DHH
Other DBs
NCBI-ProteinID: QGY40713
UniProt: A0A6I6JK45
Position
2554557..2556260
AA seq 567 aa
MPCKWTARGDSRPPSGERLAEELSVSPLIVDILWNRGLTSLEEMDRFLSPGLRHLADPSE
IPGLSEAVGILAREVNAGRKLAVWGDYDVDGITSTTLVTEFFRGHGIEILHHLPNRMEEG
YGLNPAGVEALAEQGAEVLLTVDCGITDYAGVSRARELGLTVVVSDHHLPGETLPEAHAV
CDPRLREGGPYDDLAGVGVAWMLMASLNKSLPGRPVDMRGLLDLVALGTIADVVRLTGMN
RILVKNGLLVIKEAARPGMAALKVVSDYERGADLGAGQIGFNLAPRINAAGRMGDPGKAL
KLLLSPDFDSAMPIAEELNSINMERRRQETEIAEQAFAQAETMKDRAGLVLFAEHWHPGI
IGIVASRVVEKYYRPTLMLCAAEDGGLLKGSGRSISEFDLHEALKGIAPILNGFGGHKQA
AGLSILPENLEALREGFNEQVIEALGPDPLMPTLKLDRELPFASITTTLLAELEMLQPYG
MGNPEPVFGSSPVTVAEHSVFGREREHVKLVLADAETGARLPGKAWRMADKLTRDIQGRQ
MRFAFTPKIDRYRGIPKIDLRIRDWNF
NT seq 1704 nt   +upstreamnt  +downstreamnt
ttgccgtgtaaatggaccgcccgtggcgattccaggccgccctccggagagcgcctggcc
gaagagttgagtgtttctccgctcatcgtcgatatcctctggaaccgtggattgacctcg
ctggaggagatggaccggtttctcagccccgggttgcgccacctggccgacccatccgaa
attcccggcctgtccgaggctgtcggcatactggcccgtgaagtgaacgccggacgcaag
ctcgccgtctggggcgactacgatgtggacggcatcacctccaccaccctggttaccgaa
ttttttcggggccacggcatcgaaattctgcaccacctgcccaatcgcatggaggaaggc
tacggcctgaacccggccggcgtggaggcccttgccgagcagggcgctgaggtgctgctc
accgtggactgcggcatcaccgattacgctggcgtgtcccgcgcccgtgagttgggtctg
accgtggtcgtctccgaccaccacctgccgggtgagaccctgcccgaggcgcacgccgtg
tgcgatccgcgcctgcgcgagggcggcccctacgacgatctggccggggtgggcgtggcc
tggatgctcatggcttcattgaacaaatctctgccggggaggcccgtggacatgcgcggg
ttgcttgacctggtggctctgggcaccatcgcggatgtagtgcggcttacaggcatgaac
cggattctggtcaagaacggtctgttggtcatcaaggaggccgcccggcccggtatggcc
gctctgaaggttgtcagcgactatgagcgcggcgcggacctcggggccggacagatcggg
ttcaacctggccccgcgcatcaacgccgccgggcgcatgggcgacccgggcaaggcgctc
aagctgctgctctcacctgatttcgattcggccatgcccattgccgaggaactcaactcc
atcaacatggagcgccgccgtcaggagaccgagatcgcggagcaggcctttgcccaggcc
gagaccatgaaggaccgcgccgggctggtgctctttgccgagcactggcacccgggcatc
atcggcatcgtggcctcgcgggtggtggaaaagtactatcgtccgaccctgatgctctgc
gccgctgaagacggcgggctgctcaagggctcgggccgttccatctccgagttcgacctg
cacgaggccctgaaggggatcgcaccgattctcaatgggttcggcggccacaagcaggcg
gcggggctttccattctgccggaaaatcttgaagcgttgcgtgaaggtttcaacgagcag
gtgattgaggctttggggccggacccgctcatgccgaccctcaagctcgaccgcgagctg
ccgtttgcctccatcaccacaacgctgctggccgagttggagatgctccagccttacggt
atgggcaaccctgaaccggtcttcgggtcatcgccggtgaccgtggccgagcactccgtc
ttcgggcgcgagcgcgagcatgtgaagctggttctggccgacgccgagaccggtgcgcgc
ctgcccggcaaggcctggcgcatggccgacaagctgacccgcgatattcagggccgccag
atgcgcttcgccttcactccaaagatcgaccgctaccggggcattcccaagatcgacctg
cggattcgggactggaatttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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