KEGG   Pseudomonas sp. StFLB209: PSCI_4417
Entry
PSCI_4417         CDS       T03623                                 
Name
(GenBank) urea amidolyase-related protein
  KO
K01941  urea carboxylase [EC:6.3.4.6]
Organism
pses  Pseudomonas sp. StFLB209
Pathway
pses00220  Arginine biosynthesis
pses00791  Atrazine degradation
pses01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pses00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00220 Arginine biosynthesis
    PSCI_4417
  09111 Xenobiotics biodegradation and metabolism
   00791 Atrazine degradation
    PSCI_4417
Enzymes [BR:pses01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.6  urea carboxylase
     PSCI_4417
SSDB
Motif
Pfam: CT_A_B CPSase_L_D2 Biotin_carb_N CT_C_D Biotin_carb_C Biotin_lipoyl Dala_Dala_lig_C ATP-grasp ATP-grasp_3 Biotin_lipoyl_2 RimK ATPgrasp_Ter GCV_H
Other DBs
NCBI-ProteinID: BAP45119
UniProt: A0A077LRF8
Position
4945745..4949359
AA seq 1204 aa
MFESLLIANRGAIACRILRTLRELNVKGVAVYSEADLASRHVLEADQTLSLGEGAAATTY
LAVDKILAAAQVSGATAIHPGYGFLSENAAFAEACEAAGVAFVGPTPEQLRLFGLKHTAR
ALAREQGVPLLEGTELLDTLEQALLEAQAVGYPVMLKSTAGGGGIGMRVCRDSQQLSEAF
ETVKRLGQNNFSDAGVFLEKYIERARHLEVQVFGDGQGDVLTLGVRDCSIQRRNQKVIEE
TPAPNLPQGMEQALCDAAAQLAKAVNYRSAGTVEFVYDSDAGCFYFLEVNTRLQVEHGVT
EQVWGIDLVSWMVQLAAGELPPLSELREQLTPTGHAIQARLYAEDPGKDFQPSPGLLTSV
AFPAAHGRALRIDTWVEAGCEIPPFFDPMIAKLIAWAPDREQARTGLQRALGETRLYGVE
TNCGYLGEILASRPFVTGQPWTRCLEALVYHPHTFEVVVGGTQTSVQDYPGRLGYWAVGV
PPSGPMDSRALRLGNRLLGNPEGLAGLEITINGPVLRFNTEAVVAVTGAPLPVTLDGEAA
PMNTTIHVKAGAVLTLGAVSGAGARSYLTLRGGIDVPDYLGSKSTFTLGQFGGHGGRALR
AGDVLHITELSDSSAGASLPRQPALPAVRAIRVIYGPHGAPEYFTESYMDRFFATDWEVH
FNSSRTGVRLIGPKPEWVRSDGGEAGLHPSNIHDNPYAIGAVDFTGDMPVILGPDGPSLG
GFVCPVTVIEADLWQLGQLKAGDKLRFIPTDVVQARQLATRELLEVPPAVIGEVATAVLA
SPIVLDIGESDTRLVARLAGDTHLLLEIGGPELNLVLRFRGHALMQALESLALDGVIDLT
PGIRSLQVHYQPEQVSLEQLLSAVAGEWDAVCAADDLQVPSRVVHLPLSWDDPACQLAIE
KYMTTVRKDAPWCPSNLEFIRRINDLPDLDAVQRTVFEASYLVMGLGDVYLGAPVATPLD
PRHRLVTTKYNPARTWTAENSVGIGGAYMCVYGMEGPGGYQFVGRTLQMWNRYRQVAAFN
GKPWLLRFFDQIRFYPVTADELLTIRRDFPLGRFDLQIEEGELRLSDYQDFLAKEADGIE
AFREQQQAAFRAERERWIASGQAHFDSQEEVAELTQDDVLEQGCSGVESPIAGNLWQVQA
TPGTHVEAGDVLVILESMKMEIPVLASCAGIVREVLVSPGSAIRAGQRVVVIQEAEAGKV
PESA
NT seq 3615 nt   +upstreamnt  +downstreamnt
atgttcgaatcgttgctcatcgccaaccgtggcgccatcgcttgccgcatcctgcgcacc
ttgcgtgaactgaatgtcaaaggcgtcgctgtctattcagaggctgacctcgccagccgc
catgtattggaggctgaccagaccttgagcctgggggagggcgcagcggccactacttat
ctggccgtcgataaaatcctggcggctgctcaggtgagtggcgccaccgcgatccacccc
ggttacggctttctttccgaaaatgccgccttcgccgaagcctgcgaagcggctggcgtt
gcctttgtagggccgacgcctgagcaattgcggctgttcggcctcaagcacaccgcacgc
gccctggcacgcgaacagggcgtgccgctgctcgaaggcaccgaactgctggacacgctg
gagcaggcactgcttgaggcgcaggcggttggctacccggtcatgctcaaaagcaccgcc
ggtggcggcggcatcggcatgcgcgtgtgccgcgacagccagcaactgagcgaggcgttc
gagacagtcaaacgcctgggccagaacaatttcagtgacgccggtgtgttccttgaaaaa
tacatcgagcgtgcgcggcaccttgaggttcaggtgttcggtgacggtcagggtgatgtg
ctgaccctgggggtacgtgactgctccattcagcgccgcaaccagaaagtcatcgaagaa
accccggcgcccaacctgccgcagggcatggagcaggcactgtgtgacgccgctgcgcaa
ctggccaaggccgttaactaccgcagcgccggcacggttgagttcgtctatgacagcgat
gccggctgcttctactttctggaggtcaatacccggctgcaggtcgagcatggcgtcact
gagcaagtatggggcatcgatctggtgagctggatggtgcaactggccgccggcgaactg
ccgcccctgagcgaactgcgcgagcaactgacgccgaccgggcacgccattcaggcaagg
ttgtatgccgaagatcctggcaaagactttcagccaagcccaggcttgctcacctcggtg
gcctttcctgcagcgcacgggcgcgccttgcggatcgacacctgggtcgaggctggctgc
gaaatcccgccgtttttcgaccccatgattgccaaactcatcgcctgggccccggaccgc
gaacaggcacgtaccggcctgcaacgtgcgctcggcgaaacccgcctgtatggggtagaa
accaactgtggctatctgggcgaaatcctcgccagccggccgtttgtgacgggccagcca
tggacgcgatgcctggaagcgcttgtttaccacccgcacaccttcgaagtggtggtcggc
ggtacccagaccagcgtgcaggactatcccggccggctgggctattgggcggtgggcgtg
ccgccttccggtccgatggacagccgcgccttgcgccttggcaaccgcctgctcggcaac
ccggaggggctggcaggtctggagatcaccatcaatggcccggtactgcgcttcaacacc
gaggcggtggtggccgtcactggcgcgccactgccggttaccctggatggcgaagcggcg
ccgatgaacacgaccatccatgtcaaggccggcgcggtgctgaccctgggcgccgtcagc
ggggcgggcgcgcgcagctacctgaccctgcgcggcggaattgacgtgccggactacctg
ggcagcaaaagtaccttcaccctcggccagtttggcggccacggggggcgtgcgctgcgg
gcaggggatgtactgcacatcacggagctgagcgactccagtgccggcgcgtctctgccg
cgacaacccgccttgcctgcggtccgtgccatccgggtgatctatggtccgcatggggcg
ccggagtacttcaccgagtcgtacatggaccggttcttcgccaccgactgggaagtgcac
ttcaactccagccgcaccggcgtacgcctgatcggccccaagcctgaatgggtgcgcagc
gacggcggcgaagcgggcctgcacccctccaatatccacgacaacccatatgccatcggc
gcagtggacttcaccggcgacatgccggtgatcctcggcccggacggtccgagcctgggt
ggcttcgtctgcccggtgaccgtcatcgaagctgacctctggcaactcggccagctcaag
gccggtgacaagctgcgtttcatcccgaccgacgttgtgcaggcccgccagctggcaacc
cgcgaattgctggaggtgccgccggccgttatcggcgaggtggcgaccgccgtgctggca
tcgccgattgtgctcgacattggtgagtccgacacccgcctggtcgcccggctggccggc
gatacccatctgctgctggaaatcggcggtccggaactcaatctggtattgcgctttcgc
ggccatgcgctgatgcaggcacttgaaagcctggcgctggacggcgtgatcgatctcacc
cccggtatccgttcactgcaagtgcactaccagccagagcaggtgagcctggagcaactg
ctgagcgcagtggctggcgagtgggacgcggtctgcgccgctgacgacctgcaagtgccc
tcgcgcgttgtgcatctgccgctgtcctgggatgacccggcgtgccagctggccatcgag
aaatacatgaccacggtgcgcaaggacgccccatggtgccccagcaacctggaattcatc
cgccgcataaacgacctgccggatctggacgccgtgcagcgtacagtcttcgaggccagt
tacctggtcatgggcttgggcgatgtgtacctcggcgcgccggtggccacaccgctggac
ccgcgtcaccggctggtgaccaccaaatacaacccggcccgcacctggaccgccgaaaac
tcggtcggaatcggcggtgcctatatgtgtgtgtacggcatggaagggccggggggctat
cagttcgtcgggcgaaccctgcagatgtggaaccgctaccggcaagtcgcagcgttcaac
ggcaagccctggctgctgcgcttctttgaccagattcgcttttacccggtcacggctgac
gagttgctcaccatccggcgtgacttcccgctcggcaggtttgacctgcagatcgaagaa
ggggagctgcgcctgtcggattaccaggacttcctggcgaaagaggccgacggcattgaa
gcgttccgcgagcaacaacaggccgccttccgcgccgagcgcgaacgctggatcgccagc
ggccaggcgcattttgacagccaggaggaggtggccgaactcacccaggacgacgtcctg
gagcaaggctgctcaggcgtcgaaagcccgatagccggcaacctctggcaagtgcaagcc
acgccgggaacgcacgtggaagctggggacgtgctggtgattctggagtcgatgaaaatg
gaaataccggtgctggcaagctgcgccggaatcgtgcgggaggtgctggtgagccctggt
agtgcgatccgtgccggccagcgagtggtggtgattcaggaggctgaggctggaaaagtg
cctgaaagcgcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (31)   

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