KEGG   Pseudomonas sp. TCU-HL1: THL1_1290
Entry
THL1_1290         CDS       T05373                                 
Name
(GenBank) exonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
pset  Pseudomonas sp. TCU-HL1
Pathway
pset03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pset00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    THL1_1290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pset03400]
    THL1_1290
Enzymes [BR:pset01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     THL1_1290
DNA repair and recombination proteins [BR:pset03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     THL1_1290
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     THL1_1290
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      THL1_1290
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T DNA_Packaging_2
Other DBs
NCBI-ProteinID: AOE83838
UniProt: A0A1B3E2S7
Position
1392603..1394033
AA seq 476 aa
MTSSIFWHDYETTGINPRCDRPLQVAGIRTDEALNEIGEPINLYCKPSDDILPHPAACLV
TGILPGTLAEKGLGEAEFMHRVHAELAAPGTCGAGYNTLRFDDEITRYSLYRNFYDPYAR
EWQGGNSRWDLIDLVRTAYALRPEGIEWPQQDGRVSLRLELLTAANGIDHGQAHDALSDV
RATIALARLLRQRQPKLFDYLYQLRSKHKVQEQVKLLQPLVHISGRFSGARHYLAVVLPL
VWHPRNRNALIVLDLQSDPAPLLELDAERLRQRLYTRRDELADGELPVPLKLLHINRCPV
VAPLAVLREPDRLRLGVDLELCLRRATLIGEQARVWQEKLPVIYAEEAFASQEDPEQQLY
DGFLGERDRRLCEQVRRADPQRLSRENWPFDDPRLPELLFRYRARNFPETLSETDQSRWT
EFCRNRLMSPEFGAPNTLASFFRALDEIQAKADPKEEAVLLEWRRYATELGSRYQL
NT seq 1431 nt   +upstreamnt  +downstreamnt
gtgacatccagcattttctggcacgactacgaaaccaccggcatcaacccgcgctgtgac
cggccgctgcaggtggccggtattcgcaccgacgaggcgctcaacgagatcggcgaaccg
atcaacctctattgcaagcccagcgacgacattcttccccatcctgccgcctgtctggtc
accggcatcctgcccggaaccctggcggagaaggggttgggtgaagcagagttcatgcac
cgggtgcatgccgaactcgcggcgccggggacctgtggcgccgggtacaacaccctgcgc
ttcgatgatgagatcacccgttacagcctctaccgcaatttctatgacccctatgcccgc
gagtggcagggcggcaacagtcgctgggacctgattgacttggtccgtaccgcgtatgcg
ctgcgtcctgaaggcatcgaatggccacagcaggacgggcgcgtcagcttgcgcctggaa
ctgctcaccgcggccaacggcatcgaccatggccaggcccacgacgcactgtccgacgta
cgcgcgaccattgccctggcgcgcctgctgcggcagcgccagccgaagctgttcgactac
ctctaccaactgcgcagcaagcacaaggtgcaggaacaggtgaaactgctgcagccgctg
gtgcatatttccgggcgcttttccggcgcgcgtcattacctggcggtggtgctgcccctg
gtgtggcacccgcgcaatcgcaacgccctgatcgtgctggatctgcaatccgatccggcg
ccgctgctggaactggacgccgaacgcctgcgccagcgtctgtatacccgccgcgatgaa
ctggccgacggtgagttgccggttccgctgaaattgctgcatatcaaccgttgcccggtg
gtggctccgcttgcggtgctgcgcgaacctgatcggctgcgcctgggcgtcgatctggaa
ctgtgcctgcgccgcgcgaccctgatcggcgagcaggccagggtctggcaggaaaagttg
ccggttatttatgcggaagaagctttcgcctcgcaggaagatccggagcagcagttgtat
gacggattcctgggcgagcgtgatcgccggctctgcgaacaagtgcggcgagccgatccg
cagcgcttgtcccgcgagaactggccattcgacgacccgcgcttgccggagttgttgttc
cgataccgcgctagaaacttccctgaaactttgtcggaaacggaccaatcacgctggacg
gagttctgcagaaatcggctgatgagcccggaattcggggcacctaataccttggcgagt
ttcttccgggccctggatgaaattcaggccaaggctgacccgaaggaggaggcagtgttg
ctggagtggcgtcgttatgcgacggaactgggtagccgctaccagttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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