KEGG   Pseudomonas sp. TCU-HL1: THL1_2735
Entry
THL1_2735         CDS       T05373                                 
Name
(GenBank) RNA-binding protein S4
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
pset  Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:pset00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pset03009]
    THL1_2735
Enzymes [BR:pset01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     THL1_2735
Ribosome biogenesis [BR:pset03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    THL1_2735
SSDB
Motif
Pfam: S4 PseudoU_synth_2
Other DBs
NCBI-ProteinID: AOE85283
UniProt: A0A1B3E6Y4
Position
complement(2947883..2948593)
AA seq 236 aa
MTDPIRLSKRVIELTGCSRREAELYIEGGWVTVDGEVMEQPQCKVTDQAVALLPGATPEP
LEPVTLLLNPPPGLTLEAAVRLLSPESRWADDRADVRLLRSHFARLTSTLPLQPKASGLL
VLTQDWRTLRKLNEDATKLEQEYVVEVTGTPAANGLERLKRGIKVKGEELPPVKASWQNE
THLRFALKNPRPGLIAAYCAAVGLNVASMKRIRIGGVPMGKVPVGQWRYLGAAERF
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaccgatccaattcgcttgtccaaacgtgttatcgagctgaccggctgttcgcgccgg
gaagcggagctttacatcgaaggtggctgggtcacggtggacggtgaggtgatggaacag
ccgcagtgcaaggtgacggaccaggccgtcgcgttgctgcccggcgccacgcccgagccg
ctggagccggtaacgctgctgctcaatccgccccccggcctgaccctggaagcggccgtg
cgcctgctctcgccggaaagccgctgggccgacgaccgtgccgacgtgcgcctgctgcgg
agccacttcgcccgcctgaccagcaccctgcccttgcagccaaaggccagcggcctgctg
gtgctcacccaggactggcgcaccctgcgcaagctcaatgaagacgccaccaagctggag
caggaatacgtggtggaagtcaccggcaccccggcggccaacgggctggagcgcctgaag
cgcggcatcaaggtcaagggcgaggagctgccgccggtcaaggccagctggcagaacgaa
acccacctgcgcttcgccctgaagaacccccgcccggggctgatcgccgcttactgcgct
gcggtcggcctcaacgtcgccagcatgaagcgcatccgcatcggtggcgtacccatgggc
aaggtgccggttgggcagtggcgctacctgggggctgccgaacggttctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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