KEGG   Pseudomonas sp. TCU-HL1: THL1_3511
Entry
THL1_3511         CDS       T05373                                 
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
pset  Pseudomonas sp. TCU-HL1
Pathway
pset02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pset00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    THL1_3511
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pset02044]
    THL1_3511
Secretion system [BR:pset02044]
 Type IV secretion system
  Trb secretion system protein
   THL1_3511
SSDB
Motif
Pfam: VirB8 Sensor
Other DBs
NCBI-ProteinID: AOE86059
UniProt: A0A1B3E938
Position
3739298..3740005
AA seq 235 aa
MRFKRPRVRYSDTPQPATPYQAAAQAWDQRIGSSLAQARNWRLMAFGCLSLALLMAAGLV
WRSAQSMVTPYVVEVDNAGQVRAVGEAASPYQPQDAQIAHHLARFIERVRALSIDPVVVR
QNWLEAYHSTTDRGAATLNDYARAHDPFTRVGKESVTVEVTSVVRASDSSFQVRWNERRY
VNGAATGLERWTAVISVVLQPPRTEEKLRRNPLGIYVNGLSWSRELDTTEGAKKP
NT seq 708 nt   +upstreamnt  +downstreamnt
atgcgattcaaacgtccacgggtgcgctacagcgacaccccgcaaccagccacgccttac
caagccgcagcgcaggcctgggaccagcgcataggcagcagcctggcacaggcgcgcaac
tggcggctgatggccttcggttgcctgagcctggccctgctgatggccgctggcctggtc
tggcgctcggcccagtcgatggtcacgccctacgtggtcgaggtcgacaacgccggccag
gttcgcgcggtgggcgaagccgccagcccctaccaaccccaggatgcacagattgcccat
cacctggcgcgctttatcgagcgggtgcgggccttgtccatcgacccggtggtggtgcgg
cagaactggctggaggcctaccactccaccaccgaccgcggcgccgcgacgctcaacgac
tacgcccgcgcccacgatcccttcacccgggtcggcaaggagtcggtgacggtcgaggtg
accagcgtagtgcgcgccagcgacagctcgttccaggtgcgctggaacgagcgccgctac
gtcaacggcgcggccaccgggttggagcgctggacggcggtgatctcggtggtgctgcag
ccgccgcgtaccgaggaaaagctgcgtcgcaacccattgggcatctacgtcaacggcctg
tcatggagccgtgaactggacactacggaaggagccaagaagccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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