KEGG   Pseudomonas sp. TCU-HL1: THL1_3643
Entry
THL1_3643         CDS       T05373                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
pset  Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:pset00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pset03032]
    THL1_3643
   03036 Chromosome and associated proteins [BR:pset03036]
    THL1_3643
   03400 DNA repair and recombination proteins [BR:pset03400]
    THL1_3643
DNA replication proteins [BR:pset03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    THL1_3643
Chromosome and associated proteins [BR:pset03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    THL1_3643
DNA repair and recombination proteins [BR:pset03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      THL1_3643
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-CCDC81_bac_1
Other DBs
NCBI-ProteinID: AOE86191
UniProt: A0A1B3E9H3
Position
complement(3877371..3877643)
AA seq 90 aa
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKAGDSVVLVGFGTFAVKERAARTG
RNPQTGKPIKIAAAKIPGFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtcggaactgattgatgctatcgccgcatctgctgacatcccgaaagctgta
gctggccgcgcgctggacgcagttatcgaatccgttactggcgctctgaaggctggtgac
tccgtggtgctggttggcttcggtactttcgctgttaaagagcgtgctgctcgtactggc
cgcaacccgcagactggcaagccgatcaagatcgctgctgccaagatccctggcttcaaa
gctggcaaagctctgaaagacgccgtcaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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