KEGG   Pseudomonas sp. TCU-HL1: THL1_3760
Entry
THL1_3760         CDS       T05373                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pset  Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:pset00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pset02048]
    THL1_3760
Enzymes [BR:pset01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     THL1_3760
Prokaryotic defense system [BR:pset02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   THL1_3760
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD
Other DBs
NCBI-ProteinID: AOE86308
UniProt: A0A1B3E9T5
Position
complement(3998165..4001272)
AA seq 1035 aa
MSTVGQIEKKTQQRVAKLFQQALGYEHLGDWVERPNNANIEPDLLRGWLAERSVEANLAS
RAIFELNKAANDSSKGLYDRNKAVYELLRYGVKIKPEVGENTQTVWLIDWKQPDHNHFAI
AEEVTIKGADAKANTKRPDIVLYVNGIALGVLELKRSKVAVNEGIRQNLDNQKAEFIQPF
FSTMQYVMAGNDTQGLRYGTIQTGEKYYLTWKEEHADSAAADNLLDRHLLQLCNKTRFLE
LIHDYIVFDSGVKKLCRHNQYFGIREAQRYLRRREGGIIWHTQGSGKSLTMVWLTKWIRE
NIQDSRVLIITDRTELDEQIEKVFTGVNEQIVRTTSGADLIDKLNQPSPWLLCSLIHKFG
AREDADVEGFVEELRKSLPPDFRAKGDLYVFVDECHRTQSGELHKAMKLILPNAVFIGFT
GTPLLKADKQKSIEVFGRYIHTYKFNEAVADGVVLDLRYEARDIDQNITSQKKIDQWFEA
KTKGLNDLAKAQLKQRWGTLQKVLSSQSRLEKIVADILLDIATKQRLADGRGNAMLVTSS
IFEACKCYELFSKAGMGDKCAIVTSYKPSPADIKGEATGEGLTEKLRQYAIYNQMLGDKD
PETFEKEVKQRFIKEPGQMRLLIVVDKLLTGFDAPSATYLYIDKQMRDHGLFQAICRVNR
LDGEDKQYGYIIDYKDLFKQLEGAIGDYTSGALDGYDEADVAGLLGDRLSKAQDDLEDAR
EAIKALCEPVEQPKDTPAYLRFFCGTDSGNAEQLKANEPKRLNLYKMTSALIRCFGNIAN
ELEEAGYSPKEIAEIQAEVDHFSKVRDEVKLASGDYIDLKAYEPDMRFLIDTYIRAEDSE
KISAFDDMSLIELIVERGVGAIDALPKGIRESQEAVAETIENNVRKLIIDESPINPKYYE
TMSSLLDALIAKRKEDAISYQEYLAEVVELTKQAKNPTSANSYPGSINSNARKALYDNLG
QNAGLALAVDAAVLDSRQDDWRANAMKIKRVRLAIKQVLDQWGKDVAEIQGDYQAGSDNE
RLETLLELVKHQHEY
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgagcactgtcggccagatcgaaaaaaagacccagcaacgcgtcgccaagctgtttcag
caggcgcttggctatgaacacctcggcgattgggtcgaacgcccaaacaacgccaatatt
gagccagaccttttgcgcggctggctggcagagcggagcgtcgaggcgaatctggctagc
cgggccatcttcgagctgaacaaggccgccaatgactccagcaagggcctgtatgaccgc
aacaaagcggtgtacgagctgctgcgctatggggtgaagatcaagccggaggtgggtgag
aacacccagacggtgtggctgatcgactggaagcagcctgatcacaaccacttcgcgatt
gccgaagaagtcaccatcaaaggtgctgatgccaaggccaataccaagcgccctgatatc
gtgctttatgtgaatggcattgccctaggtgtgttggagctgaagcgctccaaggtcgcg
gtgaacgagggcatccggcagaacctggataaccagaaagccgaatttatccagccgttc
ttctccaccatgcagtacgtgatggccggcaacgatacccagggcctgcgttatggaacc
atccagaccggcgagaagtactacctgacctggaaagaggaacacgcggacagcgccgct
gccgacaatctgctggatcggcatctgcttcagctgtgcaacaagacgcgctttctggag
ctgatccacgactacatcgtgttcgacagcggggtgaaaaagctctgccggcataaccag
tacttcggcatccgcgaggcgcagcgctacctacgtcggcgcgagggcgggatcatctgg
cacacccagggctcgggtaaatccttgaccatggtctggctgaccaagtggattcgggaa
aacattcaagactcgcgggtgctgattatcaccgaccgcaccgagctggatgagcagatt
gagaaggtgtttaccggcgtcaatgaacagatcgtgcgtaccaccagcggtgctgatctg
atcgacaagctcaaccagccttcgccctggttgctgtgctcgctgatccataagttcggt
gcccgcgaagatgccgacgtggaaggttttgtagaagagctacgcaagagcctgccgccg
gactttcgcgccaagggcgatctctatgtgttcgtcgatgagtgccaccgcacccagtcc
ggcgagctgcacaaagccatgaagctcatcctgcccaatgcggtgtttatcggctttacc
ggcacgccgctgctcaaggccgataagcagaagagcattgaggtgtttggccgctacatc
cacacctacaaatttaatgaggccgtggccgatggcgtggtgctcgacctgcgttacgaa
gcccgagatattgatcagaacatcacgtcgcagaagaagatcgatcagtggtttgaggcc
aaaaccaagggtctaaatgacctggccaaggcgcagcttaagcagcgctggggcaccttg
cagaaggtactgtcgagccagtcgcgactggagaagatcgtcgccgacatcctgctggat
atagccacaaagcagcgcctggccgatggccgaggcaatgccatgttggtaaccagcagc
atcttcgaagcctgtaagtgctacgagctattcagcaaagcgggcatgggtgacaagtgc
gccatcgtcactagctacaagccatcgcctgctgacatcaagggcgaggccaccggtgaa
gggctgaccgagaagctgcgtcagtacgccatctacaaccagatgctgggcgacaaagac
ccggagaccttcgagaaggaagtgaaacagcgcttcatcaaagagccggggcagatgcgc
ctgcttatcgtggtggacaagctgctgaccggcttcgacgcgccttcagcgacctacctg
tatatcgacaaacagatgcgcgaccacggcctgttccaggccatctgccgggtcaaccgc
ctggatggtgaggacaagcagtacggctacatcatcgactacaaagacctgttcaagcag
ctggaaggtgccattggcgactacaccagcggcgcgctggacggttacgacgaggccgat
gtggctggtcttttgggagaccggctgagcaaggctcaagacgacctggaagatgctcgc
gaggcgataaaggcgctttgcgagccggtagagcaaccgaaggatacgccggcttatctg
cgcttcttctgcggcaccgactctggcaacgccgagcagctcaaggctaatgagcccaag
cgcctgaacctatacaaaatgacctcggcgctgatccgttgcttcggcaatatcgccaac
gagcttgaagaggcgggttacagccctaaagaaatcgccgagatccaggccgaggtcgat
cacttctccaaagtgcgtgatgaggtgaagctcgccagcggcgactacatcgacctcaag
gcttacgagccggacatgcgctttttgatcgacacctacatccgcgccgaagatagcgag
aagatctccgccttcgacgatatgtcgctgattgagctgatcgtcgagcgcggcgtgggt
gccatcgacgcactgcccaagggcatccgcgaaagccaggaagcggtcgccgaaaccatc
gagaacaacgtgcgcaagttgattatcgacgagtctccgatcaacccgaagtactacgaa
actatgtcctcgctgctcgatgccctgatcgccaaacgcaaagaggacgccatcagctac
caggaatatctggccgaggtggtggaactgaccaaacaggcgaagaaccccaccagcgcc
aacagctaccctggctcgatcaacagcaacgctcgcaaggcgctgtatgacaaccttggc
cagaacgctggcctggcattggctgtagatgccgccgtgctggatagccggcaggacgac
tggcgcgccaatgccatgaagatcaaacgcgtgcgcctggcgatcaagcaggtattggat
caatggggcaaggatgttgccgaaatccagggcgactaccaagccggctcggacaacgag
cggctggaaaccttgctggaactggtcaagcatcagcatgagtattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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