KEGG   Pseudomonas sp. TCU-HL1: THL1_3970
Entry
THL1_3970         CDS       T05373                                 
Name
(GenBank) ATPase AAA
  KO
K10941  sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pset  Pseudomonas sp. TCU-HL1
Pathway
pset02020  Two-component system
pset02025  Biofilm formation - Pseudomonas aeruginosa
pset02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pset00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    THL1_3970
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    THL1_3970
  09142 Cell motility
   02040 Flagellar assembly
    THL1_3970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pset03000]
    THL1_3970
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pset02035]
    THL1_3970
Transcription factors [BR:pset03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    THL1_3970
Bacterial motility proteins [BR:pset02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    THL1_3970
SSDB
Motif
Pfam: Sigma54_activat FleQ Sigma54_activ_2 HTH_8 AAA_5 AAA_16 HTH_50 AAA_22 AAA_7 AAA nSTAND3 AAA_19 bpMoxR
Other DBs
NCBI-ProteinID: AOE86518
UniProt: A0A1B3EAG6
Position
complement(4229490..4230962)
AA seq 490 aa
MWRETKILLIDDNSDRRRDFAVILNFLGEEYLSCASDDWRDATDSLSASRDVLCVMLGEV
NAKGGTLELIKQLLAWDEFLPVLLIGDQIQVEWPEDLRRRLLASLEMPPSYNKLLDSLHR
AQVYREMYDHARERGRQREPNLFRSLVGTSRAIQQVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQNVDVRIIAATHKNLEQMIEAGSFR
EDLYYRLNVFPIDMAPLRERVEDIPLLINELISRMEHEKRGSIRFNSAAIMSLCNHDWPG
NVRELANLVERMAIMHPYGVIGVSELPKKFRHVDDEDEQLKASLREEIEERSAIGAGLPG
VSAPALLPPEGLDLKDYLGNLEQGLIQQALDDASGVVARAAERLRIRRTTLVEKMRKYGM
SRRDEELAEE
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgtggcgtgaaaccaagattctgctgatcgacgacaatagcgatcgccgccgcgatttt
gcggtgatcctgaatttcctcggggaagagtacctgtcctgtgccagcgatgattggcgc
gacgcaaccgattccctgagcgccagccgcgacgtcctgtgcgtcatgctgggcgaggtg
aacgccaagggcggcacgctggaactgatcaagcaactgctggcctgggacgagttcctg
ccggtgttgctgatcggcgatcagatccaggtggaatggcctgaagacctgcgccgccgc
ctgttggccagcctggaaatgccgcccagctacaacaagctgctcgattccctgcaccgc
gcccaggtctaccgcgaaatgtatgaccacgcgcgcgagcgtggccgtcagcgtgagccc
aacctgtttcgcagtctggtcggcaccagccgtgccatccagcaggtgcggcagatgatg
cagcaggtggccgatacggatgccagcgtgctgatcctcggcgagtccggcaccggcaag
gaagtcgtggcgcgcaaccttcactaccattccaagcgccgtgaagcgccgttcgtgccg
gtcaactgcggtgccattccggcggaattgctggaaagcgaactcttcggccatgagaag
ggcgccttcaccggcgccatcaccagccgggccgggcgcttcgagctggccaacggcggc
accctgttcctggacgagatcggcgacatgccgctgccgatgcaggtcaagctgctgcgc
gtgctgcaggaacgcaccttcgagcgggtcggcagcaacaagacgcagaatgtggacgtg
cgcatcatcgccgcgacccacaagaatctcgagcagatgatcgaggccggcagcttccgc
gaagacctctactaccgcctcaacgttttccccatcgacatggcgccgctgcgtgagcga
gtggaagacattccgctgctgatcaacgagctgatttcgcggatggagcatgagaagcgc
ggttccatccgcttcaactccgccgccatcatgtccctgtgcaaccacgattggccgggc
aacgtccgtgagctggccaacctcgtcgagcgcatggcgatcatgcatccgtacggcgtc
atcggcgtcagcgagctgccgaagaagttccgccatgtcgacgacgaggacgagcagctc
aaggccagcctgcgcgaggaaatcgaggagcgttcggccatcggtgccggcctgcctggt
gtcagtgctcccgcgctgctgccgccggaaggtctggacctcaaggactacctcggtaac
ctcgagcagggcctgatccagcaggcgctggacgatgcatccggcgtggtggcccgtgcg
gccgagcgcctgcgcatccgtcgtaccaccctggtggagaagatgcgcaagtacggcatg
agccgtcgcgacgaggaattggcggaagaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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