KEGG   Pseudomonas sp. TCU-HL1: THL1_4076
Entry
THL1_4076         CDS       T05373                                 
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
pset  Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:pset00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pset03021]
    THL1_4076
Transcription machinery [BR:pset03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     THL1_4076
SSDB
Motif
Pfam: DUF6596 Sigma70_r2 Sigma70_r4_2 Sigma70_r4 TPR_2 TPR_1 TPR_7 TPR_8 TPR_14
Other DBs
NCBI-ProteinID: AOE86624
UniProt: A0A1B3EAW0
Position
complement(4365137..4366375)
AA seq 412 aa
MDEAGLRQQVEAIYRSDSRRVLATLIRLLGDFDLAEEALHDAFIAAVQQWPRDGIPTNPR
AWLVSAGRFKAIDGLRRRARFDASKRHLVEELEEAASAFEGGEDLEDDRLRLIFTCCHPA
LPADAQVPLTLREVCDLKTEEIARAFLSTPSTIAQRIVRAKAKIRDARIPYQVPALAELP
ERLDNVLRVIYLVFNEGYSASSGDSLTRTDLSAEAIRLARLLLELLPDPEVMGLLALMLL
HDSRRAARATEDGELILLDDQDRSLWNQAQIAEGLALVTQALASRRVGVYLLQAAIAAVH
AQAADAARTDWGQIVGLYDVMLRLVQSPVVALNRAVAIAMRDGPASGLQEVDALLEGGEL
RDYHLAHAARADFCRRLGRKAEAAEAYRSALALVRQEPERRFIEKRLRELET
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggacgaggctggactgcgccagcaggtcgaggcgatctaccgcagcgactcgcgtcgc
gtgctggccacgctgatccgcctgctaggggatttcgacctggccgaagaagccctgcac
gacgccttcatcgccgccgtgcagcaatggccgcgggacggcatccctaccaacccgcgc
gcctggctggtgtcggccggtcgcttcaaggccatcgacggcctgcgccggcgtgcccga
ttcgatgcctccaagcgccatctggtggaggaactggaggaggccgccagcgccttcgag
gggggtgaggatctggaggacgaccgcctgcggctgatctttacctgctgccacccggca
ttgccggccgacgcccaggtacccctgaccctgcgcgaggtctgcgacctgaagaccgag
gaaattgcccgcgcctttctcagcaccccgtccaccattgcccagcgcatcgtgcgcgcc
aaggcgaagatccgcgacgcgcgcatcccctatcaggtgccggccctggccgaactgccg
gagcggctggataacgtcctgcgggtcatctacctggtgttcaacgaggggtattcggca
tcttccggcgactccctgacccgtaccgacctgtcggcggaggccatccgcctggcccgg
ctgctgctcgaactgctgcccgatccggaagtcatgggcctgctggcattgatgctgctg
cacgactcgcgccgcgccgcccgcgccaccgaggacggcgagctgattctgctggacgac
caggaccgcagcctctggaaccaggcgcagattgccgaaggccttgcgctggtgacccag
gccctggccagccggcgtgtcggcgtctacctgctgcaggcggctatcgccgccgtgcat
gcccaggcagcggatgccgcgcgcaccgactgggggcagatcgtcgggctctacgacgtc
atgctgcgcctggtgcagtcgcccgtggtggcgctgaaccgtgccgtggccatcgccatg
cgcgacggcccggcgtcagggttgcaggaagtcgatgccctgctggaggggggcgagctg
cgtgactaccacctggcccacgcggcccgtgccgacttctgccggcgcctcggacgcaag
gcagaagcggctgaggcctatcgcagcgccctggcgctggtacgccaggaacccgagcga
cgtttcatcgagaagcgcctgcgcgaactggaaacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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