KEGG   Pseudomonas sp. TCU-HL1: THL1_4315
Entry
THL1_4315         CDS       T05373                                 
Name
(GenBank) RNA polymerase sigma-H factor AlgT
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
pset  Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:pset00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pset03021]
    THL1_4315
Transcription machinery [BR:pset03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     THL1_4315
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23
Other DBs
NCBI-ProteinID: AOE86863
UniProt: A0A1B3EBE1
Position
complement(4636318..4636899)
AA seq 193 aa
MLTQEQDQQLVERVQQGDKRAFDLLVLKYQHKILGLIVRFVHDAQEAQDVAQEAFIKAYR
ALGNFRGDSAFYTWLYRIAINTAKNHLVARGRRPPDSDVSAEDAEFYDGDHALKDIESPE
RVLLRDEIEATVHRSIQQLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRARE
AIDKALQPLLQGS
NT seq 582 nt   +upstreamnt  +downstreamnt
atgctaacccaggaacaggatcagcagctggtcgaacgggtgcagcagggcgacaagcgg
gctttcgatctgctggtgttgaagtatcagcacaagatcctcgggttgatcgtgcgattc
gtgcatgacgcccaggaagcccaggacgtagcccaggaagcctttatcaaggcttaccgc
gcgctcggaaactttcgcggcgacagtgcgttttatacgtggctgtaccgcatcgccatc
aacacggcgaagaaccatctggtggcgcgtggacgacgcccgccagacagtgatgtaagt
gctgaggacgccgagttttatgacggcgaccacgccctcaaggatatcgagtcgccggag
cgagtcctgcttcgcgatgagatcgaggccacagtgcaccggagcatccagcaactgccg
gaagatttgcgcacggcgctgacgctgcgcgaattcgatggtcttagttatgaagacatt
gcgagcgttatgcagtgtccggtgggtactgtgcgatcccgcatcttcagggcgcgggaa
gccatcgataaagccttgcaacctctgttgcaggggtcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system