KEGG   Aquirufa nivalisilvae: HME7025_01494
Entry
HME7025_01494     CDS       T05454                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
psez  Aquirufa nivalisilvae
Brite
KEGG Orthology (KO) [BR:psez00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psez03032]
    HME7025_01494 (topA)
   03400 DNA repair and recombination proteins [BR:psez03400]
    HME7025_01494 (topA)
Enzymes [BR:psez01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     HME7025_01494 (topA)
DNA replication proteins [BR:psez03032]
 Prokaryotic type
  DNA Topoisomerases
   HME7025_01494 (topA)
DNA repair and recombination proteins [BR:psez03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HME7025_01494 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4
Other DBs
NCBI-ProteinID: AWL09350
UniProt: A0A2S2DWE5
Position
complement(1694415..1696904)
AA seq 829 aa
MAKNLVIVESPAKAKTIEGYLGKDFVVKSSFGHVRDLPIKGDKAIDIEHDFTPTYVISPD
KTKVISELKSLAKSSEEVWLATDDDREGESISWHLKEALGLKDDTKRIVFREITKSAIQN
AILAPRKIDMDLVNAQQARRIMDRLIGFELSPVLWSKVQKGLSAGRVQSVAVRLIVEREK
EIEKHESVGTYKITALFNLPGKKVLKAELPKNFATEDEAVAFLKKCVGADFSIKSLETKP
AKKSPAPPFTTSTLQQEASRKLGYSVATTMQIAQKLYESGRISYMRTDSTMLSQEARDKA
KAAIEAAYGAKFHHARQFKTKSESAQEAHEAIRPTDFEVNSISGDAREKRLYELIWKRAI
ASQMSEAVIERTTAQIQISSTSELLIAQGEVVTFEGFLKAYLEGKDDEEEDENKDMLPPL
SIGQVLDLSELKAQERFSRPAARYTEASLVKALEEKGIGRPSTYAPTISTIIKRAYVVKE
DRAGKEREFQTWILKDQEIVGQKNTEVVGTEKAKLFPTHIGTLVTDFLVENFEEVVDYTF
TAEMEDEFDNVAKGKLAWTQLMKNFYGSFHQTIEDSKSISRSSVGGGRELGVDPVSGKKI
SVRLGKFGPFVQLGESGEDEKPVFANLSKDQSISNLTLEEAIALLERPKLPREVGIHEDK
PLIIGAGKLGPYIKYDGKFTSLPDTEDPFTLDMAGAIRVLESAQKVAEAESLGTFENELI
STGKGRFGPYVKHAGKYYSLGKTDNLASLTSERAIEIILAKRNLEANKFIKEFAENDQVK
IVNGMYGPYIQIGKRNVKIPKDQNPSELTLEQCLELGEQAPAPKKGRKK
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggcaaaaaatttggtcatcgtggagtcgcctgcaaaagctaaaaccatcgaagggtat
ttgggtaaagattttgtggtgaaatcttcgtttggtcacgtgagggaccttcctatcaaa
ggcgataaggcaattgatatagagcatgacttcacgccaacctatgtgatttcaccggat
aaaaccaaagtgatttcagaattgaaaagtttagctaaatcatctgaagaagtttggtta
gcaactgacgacgaccgtgagggagaatctatttcttggcatttaaaggaagcattaggc
ttaaaagatgatacaaaaaggattgtctttagagaaattacgaaatcggctattcaaaat
gcgattttagctcctcgaaaaatagatatggatttggtgaatgctcaacaagctcgccgt
atcatggatcgattaataggatttgaattatcacctgttctttggtctaaagttcaaaaa
ggtctttctgcaggacgtgtacaatcagttgcagttcgattaattgttgaaagagagaag
gaaattgaaaagcacgaaagtgtaggaacttataaaattacagccttattcaatttgcct
ggcaaaaaggtgttgaaggctgaattacctaagaatttcgcgacagaagatgaagcagtc
gcttttttgaaaaaatgtgttggtgcagactttagtatcaagagcttagaaacgaaaccc
gctaagaaatctccagcacctccatttactacgtcaactttacagcaagaagcatccaga
aaattggggtactcggtagctactaccatgcagattgctcaaaaattgtatgaatcagga
cgtatatcttacatgcgtactgactcaaccatgttatctcaagaagctagagataaggca
aaagcagccattgaggcagcctatggtgctaaatttcatcatgctcgccagtttaaaacc
aaaagtgaaagtgcgcaagaggctcacgaagccatccgtcctactgattttgaagtaaat
tccatatcaggtgatgcgcgtgaaaaacgtttatatgaattaatttggaaacgggccatt
gcttctcaaatgtcagaggctgtgattgaacgaactacagctcaaattcaaatttctagt
acttcggaattgttaatagcacaaggagaagtggttacttttgaaggatttttaaaggca
tatttagaaggaaaagacgatgaagaagaagatgaaaacaaagatatgttacctccattg
tccattggtcaggtacttgacttatcggaattaaaggctcaagagcgtttttctagacca
gcagcccgttacacagaggctagtttggtgaaagcattggaagaaaaaggtattggccgt
ccttctacctatgctcctacgatttctaccatcatcaagcgagcttatgtggtaaaagaa
gatcgcgctggaaaagaacgcgagtttcaaacgtggatattaaaagatcaagagattgtt
ggtcaaaagaataccgaggttgttggaacagaaaaagctaaattatttcctactcatata
ggcaccttagttactgattttttggttgagaattttgaagaagttgtggattataccttc
acagctgaaatggaagatgagtttgataatgttgccaaaggaaaattagcctggacgcaa
ttaatgaagaatttttatggttctttccatcaaaccattgaagatagcaagtcgatttca
cgtagttccgttggtggaggaagagaattgggcgttgatccagtttcaggaaagaaaata
tcggttcgtttgggaaaatttggaccattcgttcaattaggggaatctggagaagacgaa
aagcctgtttttgctaatctttcgaaggaccaatccatttctaatttaacattagaagaa
gctattgctttattagagcgtcctaaattacctcgggaagtaggaatccatgaggataaa
ccattgattattggtgcaggtaaattaggtccttacattaagtatgacggcaaatttact
agtttaccagacacagaagatccatttaccttagatatggctggagctattcgtgtgtta
gaatcagcacaaaaagtggctgaagcggaaagtctaggaacttttgaaaatgaattaatt
tctacaggaaaaggtcgttttggcccatatgttaaacatgcggggaaatactattcatta
ggtaaaacggataatttggctagtttaacttctgaacgagctattgaaatcattttagct
aagcgtaatttagaagccaataaattcattaaagaatttgctgaaaatgatcaagtaaaa
attgtcaatggtatgtatggtccatacattcaaataggaaaacgcaatgtcaaaattcct
aaggatcagaatccttccgaattaacattagaacagtgcctagaactgggtgaacaagct
ccggcacctaaaaaaggtagaaaaaagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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