KEGG   Pseudomonas aeruginosa B136-33: G655_00020
Entry
G655_00020        CDS       T02627                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
psg  Pseudomonas aeruginosa B136-33
Brite
KEGG Orthology (KO) [BR:psg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psg03032]
    G655_00020 (gyrB)
   03400 DNA repair and recombination proteins [BR:psg03400]
    G655_00020 (gyrB)
Enzymes [BR:psg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     G655_00020 (gyrB)
DNA replication proteins [BR:psg03032]
 Prokaryotic type
  DNA Topoisomerases
   G655_00020 (gyrB)
DNA repair and recombination proteins [BR:psg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      G655_00020 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: AGI78933
Position
4275..6695
AA seq 806 aa
MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE
ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV
GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN
IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEV
FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE
AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFA
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGI
GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVK
RGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLS
RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH
LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA
FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN
TLMGDAVEPRRDFIESNALAVSNLDV
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgagcgagaacaacacgtacgactcttccagcatcaaggtgctgaaggggctggatgcc
gtacgcaagcgccccggcatgtacatcggcgacaccgacgatggcaccggtctgcaccac
atggtgttcgaggtggtggataactccatcgacgaagcgctggccggttactgcagcgaa
atcagcatcaccatccatacggatgagtcgatcactgtccgcgacaatggacgcggtatt
ccggtggatatccacaaggaagaaggggtttctgcggcggaagtgatcatgaccgtcctc
cacgccggcggcaagttcgacgacaacacctacaaggtgtccggcggcttgcacggtgtg
ggcgtctcggtggtgaacgcgctgtcccatgaactgcgcctgaccatccgtcgccacaac
aaggtctgggaacaggtctaccaccacggcgttccgcagttcccactgcgcgaagtgggc
gagaccgatggctccggcaccgaagttcacttcaagccgtccccggagaccttcagcaac
atccacttcagttgggacatcctggccaagcgcatccgcgagctgtccttcctcaactcc
ggcgtcggcatcctgctgcgcgacgagcgtaccggcaaggaggagctgttcaagtacgaa
ggcggtctgaaggccttcgtcgagtacctgaacaccaacaagaccgcggtgaacgaggta
ttccacttcaacgtccagcgtgaagaggacggcgtgggtgtggaagtcgccttgcagtgg
aacgacagcttcaacgagaacctgctctgcttcaccaacaacatcccgcagcgtgacggc
ggcacccatctggccggtttccgttcggcgctgacgcgtaacctgaacaactacatcgag
gccgaaggcctggcgaagaagttcaagatcgccaccaccggcgacgatgcccgcgaaggc
ctcaccgcgatcatctcggtgaaggtaccggacccgaagttcagctcgcagaccaaggac
aagctggtctcctccgaggtgaagaccgcggtggaacaggagatgggcaagtacttcgcc
gacttcctgctggagaatcccaacgaagccaaggccgtggtcggcaagatgatcgacgcc
gcccgtgcccgcgaggccgcgcgcaaggcgcgcgagatgacccgccgcaagggcgcgctg
gacatcgccggcctgcccggcaaactggccgattgccaggaaaaggacccggcgctctcc
gaactgtacatcgtggagggtgactccgcgggcggttccgccaagcagggccgcaatcgc
cggacccaggcgatcctgccgctcaagggcaagatcctcaacgtcgaaaaggcgcgcttc
gacaagatgctctcctcccaggaggtcggtacgctgatcaccgccctgggctgtggcatc
ggccgcgaggagtacaacatcgacaagctgcgctaccacaacatcatcatcatgaccgat
gctgacgtcgacggttcgcacatccgcaccctgctgttgaccttcttcttccgccagatg
cccgagctgatcgagcgtggctacatctacatcgcccagcccccgttgtacaaggtcaag
cgcggcaagcaggagcagtacatcaaggacgaccaggccatggaagagtacatgacccag
tcggccctggaagacgccagcctgcacgtcaacgagcacgctccgggcctgtccggggca
gcgctggagaaactggtcaacgagtatcgcggggtgatcgccaccctcaagcgcctgtcg
cgcctgtatccccaggagctgaccgagcacttcatctacctgcctaccgtgtcggtggac
gacctggctaacgagtcggccatgcagggctggttggagaagttccaggcgcgcctgacc
gccgccgagaagtctggcctgacctacaaggccagcctgcgcgaagaccgcgagcgccac
ctgtggctgcccgaggtggaactggtggcccacggcctgtccagctacgtcaccttcaac
cgtgacttcttcgccagcaatgactaccgctcggtgtcgctgctcggcgaccagctgaac
agcctgctggaagacggcgcctacgtgcagaagggtgagcgcaagcgcccgatcagcgcc
ttcaaggacggcctggactggctgatggccgaaggtaccaagcgccacagcatccagcga
tacaaggggttgggcgagatgaaccctgagcagctgtgggaaaccaccatggatccgaac
gtccggcgcatgctcaaggtgaccatcgaggacgccatcgccgccgaccagatcttcaac
accctgatgggcgatgccgtggagccgcgccgcgacttcatcgaaagcaacgcgctggcg
gtgtcgaacctggacgtgtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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