KEGG   Stutzerimonas stutzeri RCH2: Psest_0239
Entry
Psest_0239        CDS       T02391                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
psh  Stutzerimonas stutzeri RCH2
Pathway
psh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:psh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Psest_0239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psh03400]
    Psest_0239
Enzymes [BR:psh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Psest_0239
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Psest_0239
DNA repair and recombination proteins [BR:psh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Psest_0239
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DZR
Other DBs
NCBI-ProteinID: AGA84850
UniProt: L0GHF7
Position
249688..250500
AA seq 270 aa
MPELPEVETTRRGIEPHLLGQRVDRVLVRDRRLRWPVPEDLDVRLSGQRIDAVERRAKYL
LIKAETGTLIVHLGMSGSLRLVDAAQPVGKHDHVDILLESGQALRYTDPRRFGAMLWSEE
PLAHVLLASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRRPAGSISRARYLKLGEEVRRILAMAIERGGTTLRDFVGGDGKPGYFQQELFVYGR
AGEFCKSCGSTLREIRLGQRASVYCSRCQR
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcccgaactcccagaagttgaaactacccgtcgtggcatcgagccgcacctgctcggt
cagcgcgtcgaccgcgtgctggtgcgcgaccggcgcctgcgctggccggttccggaggac
cttgatgtgcgcctgtccggccagcgtatcgatgccgtcgagcggcgcgccaagtacctg
ctgatcaaggccgaaaccggcacattgatcgtccatctgggtatgtcaggcagcctgcgc
ctggtggacgcggcgcagccggtgggcaagcacgatcacgtcgatattctgctggagtcc
ggccaggcactgcgctacaccgacccgcggcgtttcggcgcgatgctctggagcgaggag
cctctcgcccatgtgctgctggcgagcctcggacccgagccgctgggtgaggatttcgac
ggcgaccggctgtatcggctgtcccgcgggcggagcatggcggtcaagccgttcatcatg
gacaacgccgtggtggtgggcgtcggcaatatctatgcgagcgaggcgctgttcgccgcc
ggcatcgacccgcggcgcccggcaggaagcatctcgcgagcgcgttacctgaaactgggc
gaggaagtccgacggatactggcgatggccatcgagcgcggcggcacgaccctgcgcgac
ttcgtcggcggcgacggcaagcccggttacttccagcaggagctgttcgtctacggacgg
gccggcgaattctgcaagagctgcggctcgaccctgcgcgagattcgtctcggtcagcgc
gccagtgtctattgcagccgttgccagcgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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