KEGG   Plesiomonas shigelloides: SAMEA2665130_2033
Entry
SAMEA2665130_2033 CDS       T04378                                 
Symbol
hupB
Name
(GenBank) NS1
  KO
K03530  DNA-binding protein HU-beta
Organism
pshi  Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:pshi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pshi03032]
    SAMEA2665130_2033 (hupB)
   03036 Chromosome and associated proteins [BR:pshi03036]
    SAMEA2665130_2033 (hupB)
   03400 DNA repair and recombination proteins [BR:pshi03400]
    SAMEA2665130_2033 (hupB)
DNA replication proteins [BR:pshi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SAMEA2665130_2033 (hupB)
Chromosome and associated proteins [BR:pshi03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SAMEA2665130_2033 (hupB)
DNA repair and recombination proteins [BR:pshi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SAMEA2665130_2033 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-DNA_bdg
Other DBs
NCBI-ProteinID: SBT61536
UniProt: A0A1A9AXV6
Position
1:complement(2245784..2246059)
AA seq 91 aa
MNKSQLIDKIAANADISKAAAGRALDALIESVTESLQAGDDVALVGFGTFAVRERAARTG
RNPQTGKEIAIAAAKVPAFRPGKALKDAVNG
NT seq 276 nt   +upstreamnt  +downstreamnt
gtgaataagtctcaactgattgacaagattgcggcgaatgctgacatttctaaagccgca
gcaggtcgtgcgttagatgctttaattgagtctgtaaccgaatcactgcaggccggtgat
gatgtggctctggtaggtttcggtactttcgccgtgcgtgagcgtgcagcccgtactggt
cgtaacccacagacaggcaaggaaattgccatcgctgctgctaaagtgccagcgttccgt
ccgggtaaagcactgaaagatgccgttaatggctaa

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