KEGG   Plesiomonas shigelloides: SAMEA2665130_2833
Entry
SAMEA2665130_2833 CDS       T04378                                 
Symbol
lpd
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pshi  Plesiomonas shigelloides
Pathway
pshi00010  Glycolysis / Gluconeogenesis
pshi00020  Citrate cycle (TCA cycle)
pshi00260  Glycine, serine and threonine metabolism
pshi00280  Valine, leucine and isoleucine degradation
pshi00310  Lysine degradation
pshi00380  Tryptophan metabolism
pshi00620  Pyruvate metabolism
pshi00630  Glyoxylate and dicarboxylate metabolism
pshi00640  Propanoate metabolism
pshi00785  Lipoic acid metabolism
pshi01100  Metabolic pathways
pshi01110  Biosynthesis of secondary metabolites
pshi01120  Microbial metabolism in diverse environments
pshi01200  Carbon metabolism
pshi01210  2-Oxocarboxylic acid metabolism
pshi01240  Biosynthesis of cofactors
Module
pshi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pshi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pshi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pshi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pshi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SAMEA2665130_2833 (lpd)
   00020 Citrate cycle (TCA cycle)
    SAMEA2665130_2833 (lpd)
   00620 Pyruvate metabolism
    SAMEA2665130_2833 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    SAMEA2665130_2833 (lpd)
   00640 Propanoate metabolism
    SAMEA2665130_2833 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SAMEA2665130_2833 (lpd)
   00280 Valine, leucine and isoleucine degradation
    SAMEA2665130_2833 (lpd)
   00310 Lysine degradation
    SAMEA2665130_2833 (lpd)
   00380 Tryptophan metabolism
    SAMEA2665130_2833 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SAMEA2665130_2833 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pshi04147]
    SAMEA2665130_2833 (lpd)
Enzymes [BR:pshi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SAMEA2665130_2833 (lpd)
Exosome [BR:pshi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SAMEA2665130_2833 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox_3 Pyr_redox GIDA Lys_Orn_oxgnase HI0933_like FAD_binding_2 FAD_oxidored AlaDh_PNT_C NAD_binding_8 DAO
Other DBs
NCBI-ProteinID: SBT62256
UniProt: A0A8I2B232
Position
1:3116188..3117636
AA seq 482 aa
MKQLQVDVAVIGGGTAGLGAYRAAKAHTASVVMIEGGPYGTTCARVGCMPSKLLIAAAEA
VHQIEKAPGFGIHPNGKPQINGVEVMDRVKRERDRFVGFVLEGVDSIPAEDKIAGYARFI
DAHTLQVDDHTQIQAKRIVIATGSRPSWPAAWNSLGDRLIINDDVFNWDTLPRSVAVFGP
GVIGLELGQALHRLGVNVVMFGMGGLVGPLTDSAIRDYAERALNQEFYLDADAKVERMER
EGEQVFIRYQDKQGQMQEILVDYVLAATGRRPNVDNLGLENTALELDSRGVPQADRYTMQ
TSVPHIFIAGDASNQLPLLHEASDQAKIAGDNAGRFPDLRAGLRRSAISVVFSDPQIAMV
GSTHRELTARYGSCGCFATGEVSFENQGRSRVMLRNKGMLHVYGEQGTGRFLGAEMMGPD
AEHIAHLLAWAHQQQMTVSQMLDMPFYHPVIEEGLRTALRDLQAKLKLGPEMVAHCQTCP
GE
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaaacaattacaggttgatgtggctgtgattggcggcggtaccgccggtttaggcgcc
tatcgcgccgctaaagcgcataccgcaagcgtagtgatgattgaaggcggcccatacggc
actacctgtgcacgcgttggctgcatgccatccaaattgctgattgccgcagcagaagcg
gtgcaccaaattgaaaaagcgccgggctttggtattcaccctaacggcaagccgcagatt
aatggcgtggaagtgatggatcgcgttaagcgcgagcgtgaccgcttcgtcggtttcgtg
ctggaaggcgttgacagtattccagccgaagacaaaattgctggctatgcacgctttatc
gatgcgcacacgttgcaagtcgatgaccacacccagattcaggctaagcggattgtaatt
gcgaccggttcacgtccaagctggccggcggcgtggaatagcttaggcgatcgcctgatc
atcaacgatgacgtgttcaactgggataccctgccacgttcagtagccgtgtttggtccg
ggcgtgattgggctggagctcggtcaggcgctgcaccgtctgggcgtaaacgtggtgatg
tttggcatgggcggtctggtgggcccactgactgacagcgcgatccgcgattatgctgag
cgtgcgctgaatcaagagttctatctggacgccgacgccaaggtcgagcgtatggagcgt
gaaggcgagcaagtgtttatccgctatcaggataagcaaggccagatgcaggaaatccta
gtcgattacgtgctggccgccaccggtcgtcgtcctaatgtggataatctgggactggaa
aataccgcgctggaattagatagccgcggcgtgccacaggccgatcgctacaccatgcaa
accagcgtcccgcacatctttattgccggcgatgccagcaaccagctaccgctgctgcat
gaagcgtccgatcaggcaaagattgccggtgacaacgctggacgcttcccggatctgcgc
gctggcctgcgccgtagtgctatctcggtggtgttctccgatccgcaaattgcgatggtc
ggtagtacccaccgtgaactgaccgcccgttacgggagctgcggctgctttgccaccggt
gaagtgtcctttgaaaatcagggccgctcacgggtgatgctgcgtaataaagggatgctg
cacgtctatggcgaacaaggcaccggccgctttctcggcgccgagatgatgggtcctgat
gccgagcatatcgcgcacctgctggcgtgggcacatcaacagcagatgaccgtaagccaa
atgctggatatgccgttctaccatccggtgattgaagaagggctgcgtaccgctctgcgt
gatctgcaagctaaactgaaactgggcccagagatggtggcgcactgccagacttgccct
ggcgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (93)   

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